Pairwise Alignments

Query, 645 a.a., phosphomethylpyrimidine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 664 a.a., thiamine biosynthesis protein ThiC (RefSeq) from Shewanella amazonensis SB2B

 Score =  941 bits (2432), Expect = 0.0
 Identities = 468/648 (72%), Positives = 532/648 (82%), Gaps = 13/648 (2%)

Query: 1   MSNRKQARLEAKRFIDTLSVEPYPNSQKSYLLGSRPDIRVPVREITLSDTLVGGSKDAPI 60
           MSNR++ R  A+ FID L     PNS+K ++ GSRPDI+V +R+I  +DT +  ++    
Sbjct: 1   MSNRRETRKAAQDFIDNLKPLRRPNSEKIFIEGSRPDIQVGMRQIHQTDTRIVNTRGEET 60

Query: 61  FEPNEPICVYDTSGVYTDPSHDIDLYKGLPKLREEWIEERRDTHILPSMSSHFARERLAD 120
           FE N PI VYD +G Y+DP+ DI++ +GLPKLRE WI  R DT  L S SS+F ++RLAD
Sbjct: 61  FEANPPIKVYDCAGPYSDPNADINVRRGLPKLREGWILARSDTEELNSASSNFTQQRLAD 120

Query: 121 ETLDELRYGHLPRIRRAMGQHRVTQLHYARQGIITPEMEFVAIRENSRRLAHQDPSLLQQ 180
           + LD LR+  LP+ RRA    RVTQLHYARQGIITPEME++AIREN  R    D  L ++
Sbjct: 121 DGLDHLRFDVLPKPRRAKAGKRVTQLHYARQGIITPEMEYIAIRENMARDEVTDEQLNRK 180

Query: 181 HAGQNFGAHLPDLITPEFVRREIAEGRAIIPCNINHPESEPMIIGRNFLVKVNANIGNSS 240
             G+ FGA +   ITPEFVR E+A GRAIIP NINHPE+EPMIIGRNFLVKVNANIGNS+
Sbjct: 181 KPGEAFGALVSKPITPEFVRDEVARGRAIIPANINHPEAEPMIIGRNFLVKVNANIGNSA 240

Query: 241 VSSSIEEEVEKLVWATRWGADTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVN 300
           V+SSIEEEVEKLVW+TRWGADTVMDLSTGR IHETREWI+RNSPVPIGTVP+YQALEKVN
Sbjct: 241 VTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWIVRNSPVPIGTVPIYQALEKVN 300

Query: 301 GVAENLTWEVMRDTLLEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCL 360
           G+AE+L WEV RDTL+EQAEQGVDYFTIHAG+LLRYVPMTAKRVTGIVSRGGSI+AKWCL
Sbjct: 301 GIAEDLNWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCL 360

Query: 361 SHHQENFLYTHFREICEICAQYDVALSLGDGLRPGSIADANDEAQFAELRTLGELTQIAW 420
           SHHQENFLYTHFR+ICE+CA YDV+LSLGDG+RPGSIADANDEAQFAEL TLGEL +IAW
Sbjct: 361 SHHQENFLYTHFRDICELCAAYDVSLSLGDGMRPGSIADANDEAQFAELETLGELVKIAW 420

Query: 421 EYDVQVMIEGPGHVPMHLIKANMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAM 480
           EYDVQ +IEGPGH+PM LIK NMD+QL+HC EAPFYTLGP TTDIAPGYDH TSGIGAAM
Sbjct: 421 EYDVQTIIEGPGHIPMQLIKENMDKQLEHCAEAPFYTLGPQTTDIAPGYDHFTSGIGAAM 480

Query: 481 IGWFGCAMLCYVTPKEHLGLPNKEDVKTGLITYKLAAHAADLAKGHPGAQIRDNALSKAR 540
           I W+GCAMLCYVTPKEHLGLPNKEDVK GLI YK+AAHAAD+AKGHPGAQIRDNALSKAR
Sbjct: 481 IAWYGCAMLCYVTPKEHLGLPNKEDVKQGLIAYKIAAHAADVAKGHPGAQIRDNALSKAR 540

Query: 541 FEFRWEDQFNLALDPVTARAFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYANN- 599
           FEFRWEDQ+NL LDP TARA+HDETLPQES KVAHFCSMCGPKFCSMKI+Q+VRDYA + 
Sbjct: 541 FEFRWEDQYNLGLDPDTARAYHDETLPQESAKVAHFCSMCGPKFCSMKITQDVRDYAASL 600

Query: 600 -----------QTLDTTVIDLVMPAESIQLAMQDK-SREFLASGAELY 635
                      QTL+    +    AES   A  DK S  F  +G+ LY
Sbjct: 601 ENAARSEADSVQTLEVGAAESYSKAESYARAGMDKMSATFKQTGSALY 648