Pairwise Alignments

Query, 645 a.a., phosphomethylpyrimidine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 666 a.a., phosphomethylpyrimidine synthase ThiC from Rhodopseudomonas palustris CGA009

 Score =  776 bits (2004), Expect = 0.0
 Identities = 399/600 (66%), Positives = 460/600 (76%), Gaps = 37/600 (6%)

Query: 24  PNSQKSYLL-GSRPDIRVPVREITLSDTLVGGSKDAPIFEPNEPICVYDTSGVYTDPSHD 82
           P+S+K Y    S PD+RVP+REI LS+   G        EPN P  VYDTSG YTDP+  
Sbjct: 20  PSSKKIYATPASAPDLRVPLREIILSE---GAG------EPNLP--VYDTSGPYTDPTVV 68

Query: 83  IDLYKGLPKLREEWIEER--------RD-----------THILPSMSSHFARERLADETL 123
           ID+ KGLP+ R EW+++R        RD            H   + ++H    R  D   
Sbjct: 69  IDVNKGLPRPRTEWVKQRGGVEQYQGRDIKPEDNGNVGAAHAAKAFTAHHQPLRGLDSPP 128

Query: 124 DELRY----GHLPRIRRAMGQH--RVTQLHYARQGIITPEMEFVAIRENSRRLAHQDPSL 177
                    G  P        H   +TQ  +AR+GIIT EM +VA REN  R    + + 
Sbjct: 129 PRGEGSGVGGATPAAFARGADHPPMITQYEFARRGIITKEMIYVAERENLGRKQQLERAE 188

Query: 178 LQQHAGQNFGAHLPDLITPEFVRREIAEGRAIIPCNINHPESEPMIIGRNFLVKVNANIG 237
                G++FGA +P  ITPEFVR EIA GRAIIP NINH E EPMIIGRNFL K+NANIG
Sbjct: 189 AALADGESFGAAVPAFITPEFVRDEIARGRAIIPANINHGELEPMIIGRNFLTKINANIG 248

Query: 238 NSSVSSSIEEEVEKLVWATRWGADTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALE 297
           NS+V+SS+EEEV+K+VWA RWGADTVMDLSTGRNIH TREWILRNSPVPIGTVP+YQALE
Sbjct: 249 NSAVTSSVEEEVDKMVWAIRWGADTVMDLSTGRNIHTTREWILRNSPVPIGTVPIYQALE 308

Query: 298 KVNGVAENLTWEVMRDTLLEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAK 357
           K  G    LTWE+ +DTL+EQAEQGVDYFTIHAG+ L+Y+ +TA RVTGIVSRGGSI+AK
Sbjct: 309 KCEGDPVKLTWELYKDTLIEQAEQGVDYFTIHAGVRLQYIHLTASRVTGIVSRGGSIMAK 368

Query: 358 WCLSHHQENFLYTHFREICEICAQYDVALSLGDGLRPGSIADANDEAQFAELRTLGELTQ 417
           WCL+HH+E+FLYTHF EIC++  +YDV+ SLGDGLRPGSIADAND AQFAEL TLGELT+
Sbjct: 369 WCLAHHKESFLYTHFDEICDLMRKYDVSFSLGDGLRPGSIADANDRAQFAELETLGELTK 428

Query: 418 IAWEYDVQVMIEGPGHVPMHLIKANMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIG 477
           IAW    QVMIEGPGHVPMH IK NMD+QLK C EAPFYTLGPLTTDIAPGYDHITSGIG
Sbjct: 429 IAWAKGCQVMIEGPGHVPMHKIKINMDKQLKECGEAPFYTLGPLTTDIAPGYDHITSGIG 488

Query: 478 AAMIGWFGCAMLCYVTPKEHLGLPNKEDVKTGLITYKLAAHAADLAKGHPGAQIRDNALS 537
           AAMIGWFGCAMLCYVTPKEHLGLP++ DVKTG+ITYK+AAHAADLAKGHP AQ+RD+ALS
Sbjct: 489 AAMIGWFGCAMLCYVTPKEHLGLPDRNDVKTGVITYKIAAHAADLAKGHPAAQLRDDALS 548

Query: 538 KARFEFRWEDQFNLALDPVTARAFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYA 597
           +ARFEFRW+DQFNL LDP TA+AFHDETLP+++ KVAHFCSMCGPKFCSMKI+Q+VRDYA
Sbjct: 549 RARFEFRWQDQFNLGLDPDTAQAFHDETLPKDAHKVAHFCSMCGPKFCSMKITQDVRDYA 608