Pairwise Alignments

Query, 645 a.a., phosphomethylpyrimidine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 683 a.a., thiamine biosynthesis protein ThiC (RefSeq) from Shewanella loihica PV-4

 Score =  960 bits (2481), Expect = 0.0
 Identities = 466/648 (71%), Positives = 539/648 (83%), Gaps = 7/648 (1%)

Query: 1   MSNRKQARLEAKRFIDTLSVEPYPNSQKSYLLGSRPDIRVPVREITLSDTLVGGSKDAPI 60
           MS R++ R EA+ FID L    +PNSQK YL GSRPD++V +R+I  SDTL+GG+ +AP+
Sbjct: 1   MSTRREMRAEAQAFIDNLKPLQHPNSQKFYLNGSRPDLKVAMRQIYQSDTLIGGTAEAPV 60

Query: 61  FEPNEPICVYDTSGVYTDPSHDIDLYKGLPKLREEWIEERRDTHILPSMSSHFARERLAD 120
           +E N PI VYD +G Y+DP  DID+ +GL KLR EWI ER DT  L  +SS F ++RLAD
Sbjct: 61  YEKNPPITVYDCAGPYSDPEADIDVRRGLVKLRSEWIAERSDTQELEQVSSGFTQQRLAD 120

Query: 121 ETLDELRYGHLPRIRRAMGQHRVTQLHYARQGIITPEMEFVAIRENSRRLAHQDPSLLQQ 180
           E LD LR+  LP+ RRA+    VTQ+HYAR+GIITPEME+VA+REN  R    +  L Q+
Sbjct: 121 EGLDHLRFEQLPKPRRALEGRVVTQMHYARRGIITPEMEYVALRENMARETVTEEVLNQR 180

Query: 181 HAGQNFGAHLPDLITPEFVRREIAEGRAIIPCNINHPESEPMIIGRNFLVKVNANIGNSS 240
             G++FGA L + ITPEFVR+E+A GRAI+P NINHPE+EPMIIGRNFLVKVNANIGNS+
Sbjct: 181 APGESFGAKLGEPITPEFVRQELAAGRAILPLNINHPEAEPMIIGRNFLVKVNANIGNSA 240

Query: 241 VSSSIEEEVEKLVWATRWGADTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVN 300
           V+SSIEEEVEKLVWATRWGADTVMDLSTGR IHETREWI+RNSPVPIGTVP+YQALEKVN
Sbjct: 241 VTSSIEEEVEKLVWATRWGADTVMDLSTGRYIHETREWIIRNSPVPIGTVPIYQALEKVN 300

Query: 301 GVAENLTWEVMRDTLLEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCL 360
           G+AE+LTWE+ RDTL+EQAEQGVDYFTIHAG+LLRYVPMTAKR+TGIVSRGGSI+AKWCL
Sbjct: 301 GIAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCL 360

Query: 361 SHHQENFLYTHFREICEICAQYDVALSLGDGLRPGSIADANDEAQFAELRTLGELTQIAW 420
           SHH+ENFLY HF EIC++CA YDV+LSLGDG+RPGSIADANDEAQFAEL TLGEL + AW
Sbjct: 361 SHHKENFLYEHFDEICQLCAAYDVSLSLGDGMRPGSIADANDEAQFAELETLGELVKKAW 420

Query: 421 EYDVQVMIEGPGHVPMHLIKANMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAM 480
           +YDVQ +IEGPGH+PM LIK NMD+QL+ C EAPFYTLGP TTDIAPGYDH TSGIGAAM
Sbjct: 421 QYDVQTIIEGPGHIPMQLIKENMDKQLELCDEAPFYTLGPQTTDIAPGYDHFTSGIGAAM 480

Query: 481 IGWFGCAMLCYVTPKEHLGLPNKEDVKTGLITYKLAAHAADLAKGHPGAQIRDNALSKAR 540
           I W+GCAMLCYVTPKEHLGLPNKEDVK GLI YK+AAHA D+AKGHPGAQIRDNALSKAR
Sbjct: 481 IAWYGCAMLCYVTPKEHLGLPNKEDVKQGLIAYKIAAHAGDVAKGHPGAQIRDNALSKAR 540

Query: 541 FEFRWEDQFNLALDPVTARAFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYANNQ 600
           FEFRWEDQ+NL LDP TARA+HDE+LPQES KVAHFCSMCGPKFCSMKI+QEVR+YA  Q
Sbjct: 541 FEFRWEDQYNLGLDPDTARAYHDESLPQESAKVAHFCSMCGPKFCSMKITQEVREYAAAQ 600

Query: 601 TLDTTVIDLVM-------PAESIQLAMQDKSREFLASGAELYHPLVKE 641
             D   I++         P   IQ  M   S +F  SG+ELYH  +++
Sbjct: 601 ATDVREIEVEQIDVTASAPKADIQQGMAQMSAQFKQSGSELYHSAIRQ 648