Pairwise Alignments

Query, 645 a.a., phosphomethylpyrimidine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., thiamine biosynthesis protein ThiC (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  295 bits (754), Expect = 4e-84
 Identities = 169/404 (41%), Positives = 234/404 (57%), Gaps = 12/404 (2%)

Query: 194 ITPEFVRREIAEGRAIIPCNINHPESEPMIIGRNFLVKVNANIGNSSVSSSIEEEVEKLV 253
           + P+ +R  I  G  ++  N +HP   P+++G+   VKVNANIG S + ++ + E+EKL 
Sbjct: 27  LAPQTIRDGIEGGTMVLLGNPSHPSLRPLLVGQPSRVKVNANIGTSPLCNNPDREIEKLA 86

Query: 254 WATRWGADTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVNGVAENLTWEVMRD 313
            A   GADTVMDLS   ++   R+ +L   P+P+GTVP+Y   +K     ++       +
Sbjct: 87  AALAAGADTVMDLSIAGDLLAIRKGMLAACPLPLGTVPLYSVAQKYLDKGKDPAGMDPEE 146

Query: 314 TLLE---QAEQGVDYFTIHAGLLLRYVPMTAK--RVTGIVSRGGSIIAKWCLSHHQENFL 368
              E   QAEQGVD+ T+H GL  R      +  RV GIVSRGGSI+A+W   + +E  L
Sbjct: 147 LFAEIEMQAEQGVDFMTVHCGLTRRGAEWATEGGRVLGIVSRGGSILARWMRKNGKETPL 206

Query: 369 YTHFREICEICAQYDVALSLGDGLRPGSIADANDEAQFAELRTLGELTQIAWEYDVQVMI 428
              +  I EI  +++V LSLGDGLRPG+ ADA D AQ+ E+  LG L +      VQ MI
Sbjct: 207 LEQYDRILEIARRHNVTLSLGDGLRPGAGADAGDAAQWEEVMMLGRLAKAGLAEGVQCMI 266

Query: 429 EGPGHVPMHLIKANMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAM 488
           EGPGHVPMH ++A +    K  + AP Y LGPLT D +PGYDHI   IG A+    G   
Sbjct: 267 EGPGHVPMHEVEAQIVGIKKLTNNAPLYVLGPLTIDSSPGYDHIAGAIGGAIGVRAGVDF 326

Query: 489 LCYVTPKEHLGLPNKEDVKTGLITYKLAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQ 548
           LCY+TP EHL LP  EDVK G++  ++AA A ++A G   A  R+  +S+AR    W+  
Sbjct: 327 LCYLTPAEHLTLPTIEDVKAGVMASRIAAQAGEVALGRRHALEREAGMSQARMALDWDGM 386

Query: 549 FNLALDPVTARAFHDETLPQESGKVAHFCSMCGPKFCSMKISQE 592
              ALDP    A   E   +E       C+MCG KFC++K+ ++
Sbjct: 387 KRCALDPEMVDARRGEHRNEEE------CAMCG-KFCAVKMLRD 423