Pairwise Alignments

Query, 645 a.a., phosphomethylpyrimidine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., thiamine biosynthesis protein ThiC (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  305 bits (781), Expect = 3e-87
 Identities = 175/414 (42%), Positives = 241/414 (58%), Gaps = 17/414 (4%)

Query: 189 HLPDL-----ITPEFVRREIAEGRAIIPCNINHPESEPMIIGRNFLVKVNANIGNSSVSS 243
           HL DL     + PE +R  I  G  ++  N +HP   P+++G+   VKVNANIG S + +
Sbjct: 17  HLADLSREEGLAPETIRDAIERGTMVLLGNPSHPSLRPILVGQPARVKVNANIGTSPMRN 76

Query: 244 SIEEEVEKLVWATRWGADTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVNGVA 303
             E E++K+  A   GADT+MDLS   ++   R  +L   P+P+GTVP+Y   +K     
Sbjct: 77  HPECEMQKVDAAVEAGADTIMDLSIAGDLDAIRREMLARCPLPLGTVPLYSVAQKYIECG 136

Query: 304 EN---LTWEVMRDTLLEQAEQGVDYFTIHAGLLLRYVPMTAK--RVTGIVSRGGSIIAKW 358
           ++   +  E +   + +QA+QGVD+ T+H GL  R     AK  R+ GIVSRGGSI+A+W
Sbjct: 137 KDPALIDPEEIFAEIEKQAQQGVDFMTVHCGLTRRGAEWAAKGDRLLGIVSRGGSILARW 196

Query: 359 CLSHHQENFLYTHFREICEICAQYDVALSLGDGLRPGSIADANDEAQFAELRTLGELTQI 418
            L H +EN L T +  I +I  +Y+V LSLGDGLRPG+ ADA D AQ+ E+  LG+L + 
Sbjct: 197 MLRHDRENPLLTGYDRILDIARKYNVTLSLGDGLRPGAGADAGDAAQWEEVMVLGQLAKR 256

Query: 419 AWEYDVQVMIEGPGHVPMHLIKANMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIGA 478
             E  VQ MIEGPGHVPM+ ++A +    K  H AP Y LGPL  D  PGYDHI   IG 
Sbjct: 257 GLEAGVQCMIEGPGHVPMNEVEAQIVGIKKLTHGAPLYVLGPLVIDSCPGYDHIAGAIGG 316

Query: 479 AMIGWFGCAMLCYVTPKEHLGLPNKEDVKTGLITYKLAAHAADLAKGHPGAQIRDNALSK 538
           A+    G   LCY+TP EHL LP +EDV+ G+I  ++AA A ++A G P A  R+  + K
Sbjct: 317 ALAVRSGVDFLCYLTPAEHLTLPTREDVRAGVIASRIAAQAGEVALGRPHALARELGMGK 376

Query: 539 ARFEFRWEDQFNLALDPVTARAFHDETLPQESGKVAHFCSMCGPKFCSMKISQE 592
           AR    W      ALD         E   +E       C+MCG KFC++K+ ++
Sbjct: 377 ARKALDWPGMERHALDAAMVDERRGEHRNEEE------CAMCG-KFCAVKMLRD 423