Pairwise Alignments

Query, 645 a.a., phosphomethylpyrimidine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 565 a.a., thiamine biosynthesis protein ThiC (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  724 bits (1869), Expect = 0.0
 Identities = 357/578 (61%), Positives = 440/578 (76%), Gaps = 22/578 (3%)

Query: 23  YPNSQKSYLLGSR-PDIRVPVREITLSDTLVGGSKDAPIFEPNEPICVYDTSGVYTDPSH 81
           +P SQK YL G   P+IRV +R++    + V    +  I  PN  + VYDTSG ++DPS 
Sbjct: 7   FPRSQKVYLPGKLYPNIRVAMRKVEQVPS-VSFEGEEKIATPNPEVYVYDTSGPFSDPSM 65

Query: 82  DIDLYKGLPKLREEWIEERRDTHILPSMSSHFARERLADETLDELRYGHLPRIRRAMGQH 141
            IDL KGLP+LREEWI  R D   LP ++S + + R  D++LD LR+ H+    RA    
Sbjct: 66  SIDLKKGLPRLREEWIVGRGDVEQLPEITSEYGQMRRDDKSLDHLRFEHIALPYRAKKGE 125

Query: 142 RVTQLHYARQGIITPEMEFVAIRENSRRLAHQDPSLLQQHAGQNFGAHLPDLITPEFVRR 201
            +TQ+ YA++GIITPEME+VAIREN     + +   ++ H            ITPEFVR+
Sbjct: 126 AITQMAYAKRGIITPEMEYVAIRENM----NCEELGIETH------------ITPEFVRK 169

Query: 202 EIAEGRAIIPCNINHPESEPMIIGRNFLVKVNANIGNSSVSSSIEEEVEKLVWATRWGAD 261
           EIAEG A++P NINHPE+EPMIIGRNFLVK+N NIGNS+ +SSI+EEVEK +W+ +WG D
Sbjct: 170 EIAEGHAVLPANINHPEAEPMIIGRNFLVKINTNIGNSATTSSIDEEVEKALWSCKWGGD 229

Query: 262 TVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVNGVAENLTWEVMRDTLLEQAEQ 321
           T+MDLSTG NIHETREWI+RN PVP+GTVP+YQALEKVNGV E+L WE+ RDTL+EQ EQ
Sbjct: 230 TLMDLSTGENIHETREWIIRNCPVPVGTVPIYQALEKVNGVVEDLNWEIYRDTLIEQCEQ 289

Query: 322 GVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCLSHHQENFLYTHFREICEICAQ 381
           GVDYFTIHAG+    V +  KR+ GIVSRGGSI++KWCL H QE+FLY HF +IC+I AQ
Sbjct: 290 GVDYFTIHAGIRRHNVHLADKRLCGIVSRGGSIMSKWCLVHDQESFLYEHFDDICDILAQ 349

Query: 382 YDVALSLGDGLRPGSIADANDEAQFAELRTLGELTQIAWEYDVQVMIEGPGHVPMHLIKA 441
           YDVA+SLGDGLRPGSI DANDEAQFAEL T+GEL   AWE +VQ  IEGPGHVPMH IK 
Sbjct: 350 YDVAVSLGDGLRPGSIHDANDEAQFAELDTMGELVLRAWEKNVQAFIEGPGHVPMHKIKE 409

Query: 442 NMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLP 501
           NM+ Q++ CH+APFYTLGPL TDIAPGYDHITS IGAA IGW G AMLCYVTPKEHL LP
Sbjct: 410 NMERQIEKCHDAPFYTLGPLVTDIAPGYDHITSAIGAAQIGWLGTAMLCYVTPKEHLALP 469

Query: 502 NKEDVKTGLITYKLAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLALDPVTARAF 561
           +KEDV+ G+ITYK+AAHAADLAKGHPGAQ+RDNALSKAR+EFRW+DQF+L+LDP  A+ +
Sbjct: 470 DKEDVRVGVITYKIAAHAADLAKGHPGAQVRDNALSKARYEFRWKDQFDLSLDPERAQGY 529

Query: 562 HDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYANN 599
                  +      +C+MCGP FC+M++S++++  A +
Sbjct: 530 FRAGHHID----GEYCTMCGPNFCAMRLSRDLKKNAKS 563