Pairwise Alignments

Query, 645 a.a., phosphomethylpyrimidine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 720 a.a., thiamine biosynthesis protein ThiC (RefSeq) from Shewanella sp. ANA-3

 Score =  931 bits (2406), Expect = 0.0
 Identities = 471/672 (70%), Positives = 535/672 (79%), Gaps = 35/672 (5%)

Query: 2   SNRKQARLEAKRFIDTLSVEPYPNSQKSYLLGSRPDIRVPVREITLSDTLVGGSKDAPIF 61
           ++R+ AR +A+ FIDTL    +PNSQK YL GSR D+RV +R+I  +DT +GG+   P  
Sbjct: 19  TSRRAARAQAQAFIDTLKPLQHPNSQKLYLQGSREDLRVGMRQILQTDTRIGGTAAEPTV 78

Query: 62  EPNEPICVYDTSGVYTDPSHDIDLYKGLPKLREEWIEERRDTHILPSMSSHFARERLADE 121
           E N PI VYD +G Y+DP+  I++ +GL KLR  WI ER+DT +L   +S F ++RL D+
Sbjct: 79  EKNPPIPVYDCAGPYSDPAAQINVRQGLAKLRLPWIIERQDTEVLDCATSDFTQQRLKDD 138

Query: 122 TLDELRY----GHLPRIRRAMGQHRVTQLHYARQGIITPEMEFVAIRENSRRLAHQDPSL 177
            LD LR+      + R RRA+   RV+QLHYARQGIITPEME+VAIREN      QD  L
Sbjct: 139 GLDHLRFEAGSSAIVRPRRALPGKRVSQLHYARQGIITPEMEYVAIRENMALAEVQDEIL 198

Query: 178 LQQHAGQNFGAHLPDLITPEFVRREIAEGRAIIPCNINHPESEPMIIGRNFLVKVNANIG 237
            ++  G++FG  +   ITPEFVR EIA GRAIIP NINHPE+EPMIIGRNFLVKVNANIG
Sbjct: 199 NRRGQGESFGTVIGKSITPEFVRDEIARGRAIIPLNINHPEAEPMIIGRNFLVKVNANIG 258

Query: 238 NSSVSSSIEEEVEKLVWATRWGADTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALE 297
           NS+V+SSIEEEVEKLVW+TRWGADTVMDLSTGR IHETREWI+RNSPVPIGTVP+YQALE
Sbjct: 259 NSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWIIRNSPVPIGTVPIYQALE 318

Query: 298 KVNGVAENLTWEVMRDTLLEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAK 357
           KVNGVAE+LTWEV RDTL+EQAEQGVDYFTIHAG+LLRYVPMTAKRVTGIVSRGGSI+AK
Sbjct: 319 KVNGVAEHLTWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAK 378

Query: 358 WCLSHHQENFLYTHFREICEICAQYDVALSLGDGLRPGSIADANDEAQFAELRTLGELTQ 417
           WCLSHHQENFLYTHFREICE+C  YDV+LSLGDG+RPGSIADANDEAQFAEL TLGEL +
Sbjct: 379 WCLSHHQENFLYTHFREICELCVAYDVSLSLGDGMRPGSIADANDEAQFAELETLGELVK 438

Query: 418 IAWEYDVQVMIEGPGHVPMHLIKANMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIG 477
           IAWEYDVQ +IEGPGH+PM LIK NMD+QL HC EAPFYTLGP  TDIAPGYDH TSGIG
Sbjct: 439 IAWEYDVQTIIEGPGHIPMQLIKENMDKQLIHCAEAPFYTLGPQITDIAPGYDHFTSGIG 498

Query: 478 AAMIGWFGCAMLCYVTPKEHLGLPNKEDVKTGLITYKLAAHAADLAKGHPGAQIRDNALS 537
           AAMI W+GCAMLCYVTPKEHLGLPNK+DVK GLI YK+AAHAAD+AKGHPGAQIRDNALS
Sbjct: 499 AAMIAWYGCAMLCYVTPKEHLGLPNKQDVKQGLIAYKIAAHAADIAKGHPGAQIRDNALS 558

Query: 538 KARFEFRWEDQFNLALDPVTARAFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYA 597
           KARFEFRWEDQ+NL LDP TARA+HDE+LPQES KVAHFCSMCGPKFCSMKI+Q+VRDYA
Sbjct: 559 KARFEFRWEDQYNLGLDPDTARAYHDESLPQESAKVAHFCSMCGPKFCSMKITQDVRDYA 618

Query: 598 ---------------NNQTLDTTVIDLVMP-----AESIQ-----------LAMQDKSRE 626
                          NN+T +        P      E+IQ            AM  KS E
Sbjct: 619 ASLAAGALAGASSSQNNETTEALASINSAPQGQASKEAIQQIRVKTQDELAAAMAQKSAE 678

Query: 627 FLASGAELYHPL 638
           F ASGA+LY PL
Sbjct: 679 FAASGAKLYLPL 690