Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., shikimate 5-dehydrogenase from Pseudomonas stutzeri RCH2

 Score =  298 bits (762), Expect = 1e-85
 Identities = 161/271 (59%), Positives = 189/271 (69%), Gaps = 3/271 (1%)

Query: 5   IDQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNV 64
           +D+Y VFGNPI HSKSP IH LFA QT Q + Y A   P+D F   A+ FF Q G G NV
Sbjct: 1   MDRYGVFGNPIGHSKSPQIHALFAAQTGQVLRYEALLAPLDDFVGFARAFF-QDGLGANV 59

Query: 65  TVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVLLKGA 124
           TVPFKE+AYR  D+LTERAR AGAVNTLKKL+DG +LGDNTDG GLV DLL   V L+G 
Sbjct: 60  TVPFKEQAYRMTDQLTERARRAGAVNTLKKLEDGHLLGDNTDGAGLVSDLLHAGVALRGR 119

Query: 125 TILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQS 184
            ILL+GAGGA RG L+PLL Q+PA++ + NRT +KAEQLA+  A  G + A  F  L + 
Sbjct: 120 RILLLGAGGAVRGALEPLLAQRPAALIIANRTVSKAEQLAQEFAELGPLSASTFTDLAEP 179

Query: 185 YDVIINSTSASLDGELPAI-DPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCAQAIDGLG 243
            D+IIN TSASL GELP + D +I    + CYDMMY    T F QWA   G A   DGLG
Sbjct: 180 VDLIINGTSASLGGELPPLADSLIQPGHTFCYDMMYAAKPTAFCQWAAALG-ADTRDGLG 238

Query: 244 MLVGQAAESFMLWRGLRPGTKQILRELRKNL 274
           MLV QAAE+F LWRG+RP T  +L ELR+ L
Sbjct: 239 MLVEQAAEAFELWRGVRPDTAPVLAELRRQL 269