Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., shikimate dehydrogenase from Pseudomonas syringae pv. syringae B728a

 Score =  309 bits (791), Expect = 5e-89
 Identities = 163/272 (59%), Positives = 199/272 (73%), Gaps = 3/272 (1%)

Query: 5   IDQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNV 64
           +D+Y VFGNPI HSKSP IH LFA QT Q++ Y     P+D FT  A+ FF Q GRG NV
Sbjct: 1   MDRYVVFGNPIGHSKSPLIHRLFAEQTGQTLDYQTSLAPLDDFTAFAQAFF-QAGRGANV 59

Query: 65  TVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQ-QVLLKG 123
           TVPFKE+A+R AD LT+RA+ AGAVNTL KLDDG +LGDNTDG GLV+DL       L+G
Sbjct: 60  TVPFKEQAWRLADSLTQRAQRAGAVNTLSKLDDGTLLGDNTDGAGLVRDLTVNCGRSLRG 119

Query: 124 ATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQ 183
             ILL+GAGGA RG L+PLL QQPA++ + NRT  KAE+LA+  A  G V A +F+ L++
Sbjct: 120 QRILLLGAGGAVRGALEPLLGQQPAALVIANRTVEKAERLAQEFADLGPVFASSFDWLEE 179

Query: 184 SYDVIINSTSASLDGELPAIDP-VIFSSRSVCYDMMYGKGYTVFNQWARQHGCAQAIDGL 242
           S DVIIN+TSASL GELP I P +I    + CYDMMY    T F +WA +HG AQA+DGL
Sbjct: 180 SVDVIINATSASLAGELPPIAPSLIQPGVTFCYDMMYSNEPTAFCRWATEHGAAQAVDGL 239

Query: 243 GMLVGQAAESFMLWRGLRPGTKQILRELRKNL 274
           GMLV QAAE+F+LWRG+RP +  +L ELR+ L
Sbjct: 240 GMLVEQAAEAFLLWRGVRPDSAPVLAELRRLL 271