Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., shikimate 5-dehydrogenase from Synechococcus elongatus PCC 7942

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 74/263 (28%), Positives = 119/263 (45%), Gaps = 21/263 (7%)

Query: 10  VFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVTVPFK 69
           + G+PI HS SP I      +      Y    V       A     A G +G NVT+P K
Sbjct: 13  IIGDPIEHSLSPLIQNAAIAELGLDYCYVPFPVKGADLATALAGLAAIGVQGFNVTIPHK 72

Query: 70  EEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVLLKGATILLI 129
           +       +++E A+  G+VNT+ + + G + G NTD  G +  L   +    G  ++L+
Sbjct: 73  QAVMPLLSQVSELAQSVGSVNTVWQTEQGWV-GTNTDVLGFLAPLQTLRSDWSGCRVVLL 131

Query: 130 GAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQA--------FEQL 181
           G GGAAR V+   L    ++I    R   K +   +   ++G+ +A +           +
Sbjct: 132 GCGGAARAVVAGCLQLGCSAIATVVRDAQKGDAFQQ---SWGD-RADSLTIHDWSDIPDV 187

Query: 182 KQSYDVIINSTSASLDGELPAIDPVIFSS------RSVCYDMMYGKGYTVFNQWARQHGC 235
             + D+++N+T   +D  +    P+  S+       ++ YD++Y    T F Q A   GC
Sbjct: 188 LSTADLVVNTTPLGMDPHIER-SPLDNSAAQQLRPETIAYDLIYTPSPTRFLQQAIAQGC 246

Query: 236 AQAIDGLGMLVGQAAESFMLWRG 258
             AIDGL MLV Q A    +W G
Sbjct: 247 -HAIDGLEMLVQQGAAGLKIWTG 268