Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., shikimate dehydrogenase (RefSeq) from Shewanella amazonensis SB2B

 Score =  286 bits (733), Expect = 3e-82
 Identities = 150/272 (55%), Positives = 189/272 (69%), Gaps = 2/272 (0%)

Query: 3   SQIDQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGC 62
           S  D++AVFGNPI+HSKSP IH +FA++T Q++ Y A   P+DGF EA   F A GG G 
Sbjct: 5   SMTDRFAVFGNPISHSKSPQIHAMFAKETGQTLTYEAILAPLDGFAEAVTAFMAAGGCGA 64

Query: 63  NVTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVLLK 122
           NVTVPFKE+A+   D L++ AR+AGAVNTL KL DG + GDNTDG GLV DL+   V L 
Sbjct: 65  NVTVPFKEQAFTLCDELSDDARIAGAVNTLIKLPDGRLRGDNTDGMGLVADLIRHGVELN 124

Query: 123 GATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLK 182
              +LL+GAGGAARG L PL+ +  A +T++NRT +KAE LA L      V+  +   ++
Sbjct: 125 NKRVLLVGAGGAARGALLPLV-RAGAKLTISNRTLSKAEALAALCPKV-NVEVISGSHIR 182

Query: 183 QSYDVIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCAQAIDGL 242
             +DVIINSTSASL G+LP I      +++VCYDMMYG   TVFN+WAR  G    IDGL
Sbjct: 183 SPFDVIINSTSASLSGDLPVIAANAIDNQTVCYDMMYGAKPTVFNEWARSLGAKICIDGL 242

Query: 243 GMLVGQAAESFMLWRGLRPGTKQILRELRKNL 274
           GMLVGQAAESF LWR +RP    +L+ LR++L
Sbjct: 243 GMLVGQAAESFYLWRRVRPNAAPVLQTLRQSL 274