Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 276 a.a., shikimate dehydrogenase from Rhodanobacter denitrificans MT42

 Score =  213 bits (541), Expect = 5e-60
 Identities = 118/271 (43%), Positives = 160/271 (59%), Gaps = 3/271 (1%)

Query: 5   IDQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNV 64
           + Q+AVFG+PI HS SP IH  FARQ +  + Y A  V   GF  A + FFA GGRG NV
Sbjct: 3   VAQFAVFGHPIAHSLSPTIHQAFARQFEIELTYRAIDVEPAGFAAAVRRFFADGGRGANV 62

Query: 65  TVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVL-LKG 123
           T+P K  A+  AD  +  A  AG+ N L  L  G +   NTDG+GLV+DL  +  L L+G
Sbjct: 63  TLPHKAAAFALADERSVAATRAGSANVLAALVAGRLAAHNTDGDGLVRDLTERHGLDLRG 122

Query: 124 ATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLK- 182
            T LL+GAGGAA GV   LLD   A++T+ +RT   A+ LA+ +        + +  L  
Sbjct: 123 HTALLLGAGGAAHGVAWNLLDAGVATLTIVSRTATSADALADAIGEPARAHTRYWSDLAG 182

Query: 183 -QSYDVIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCAQAIDG 241
             SYD+I+N+TSA + G    + P +  +R++CYD+ YG   + F  WA   G   A DG
Sbjct: 183 IGSYDLIVNATSAGVLGVSLQLPPSLVGARALCYDLSYGTAASSFLSWATAAGARYAFDG 242

Query: 242 LGMLVGQAAESFMLWRGLRPGTKQILRELRK 272
           LGMLV  AA++F LW G RP T+ + + LR+
Sbjct: 243 LGMLVETAADAFALWHGRRPDTEPVYQALRR 273