Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

 Score =  118 bits (296), Expect = 1e-31
 Identities = 82/265 (30%), Positives = 139/265 (52%), Gaps = 23/265 (8%)

Query: 10  VFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVTVPFK 69
           + G+P++HS SP +H    +  + +  Y A  V  +   +      A   RG N+T+P K
Sbjct: 11  LIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFRGFNITIPHK 70

Query: 70  EEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVLLKGATILLI 129
               ++ D +   A   GAVNT+ K+++G+ +G NTDG G+ + L  +  +L    IL+I
Sbjct: 71  MNIMKYLDEIDCDAEAIGAVNTV-KIENGKAIGYNTDGIGVKKALEEKTGILINKNILII 129

Query: 130 GAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAA---------YGEVKAQAFEQ 180
           G+GGA+R V   L      ++T+ NR   KAE L++ ++          YG +       
Sbjct: 130 GSGGASRAVSFELAKDN--NLTIVNRNIEKAENLSKEISRKLKKENPLNYGGLDINI--- 184

Query: 181 LKQSYDVIINSTSASLDGELPAIDPVI----FSSRSVCYDMMYGKGYTVFNQWARQHGCA 236
             +++D+IIN+T   +      ++PVI        +V  D++Y     VF + A+++G A
Sbjct: 185 --ENFDIIINTTPVGMYPH-TEVEPVIPLNNIKKDAVVMDLIYNPLEPVFLKEAKKYG-A 240

Query: 237 QAIDGLGMLVGQAAESFMLWRGLRP 261
           + I+G+GMLV Q A SF +W G++P
Sbjct: 241 KTINGIGMLVYQGAVSFEIWTGIKP 265