Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., shikimate 5-dehydrogenase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  139 bits (350), Expect = 7e-38
 Identities = 95/268 (35%), Positives = 137/268 (51%), Gaps = 13/268 (4%)

Query: 8   YAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVTVP 67
           Y + G+P+ H+ SP +H           +Y A  VP   F    +        G +VT+P
Sbjct: 37  YGIVGHPLGHTLSPLLHNWGFALHSLPAVYMAWPVPPGRFASFMEAVRTLPVHGASVTIP 96

Query: 68  FKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVLLKGATIL 127
            KEEA R  DR+T+RAR  GAVNTL  L+DG + G+NTD  G +  L A+ V +  A  L
Sbjct: 97  HKEEALRLCDRVTDRARAVGAVNTL-FLEDGVVCGENTDVTGFLAPLRARGVRIDEA--L 153

Query: 128 LIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDV 187
           ++GAGGAAR VL  L++     + ++NRT  KA    EL  A+G       E+   +  +
Sbjct: 154 VLGAGGAARAVLAGLVELGVRRVRISNRTHDKA---MELAGAFGADVVPWDERGSAAAGL 210

Query: 188 IINSTSASLDGELPAIDPV---IFSSRSVCYDMMYGKGYTVFNQWARQHGCAQAIDGLGM 244
           ++N+T   + G      P+    FS R + YD++Y    T F   AR  G  +  DGLGM
Sbjct: 211 VVNTTPCGMQGARMGESPLPEGAFSGRGMAYDLVYNPLTTRFLADARAAGW-ETQDGLGM 269

Query: 245 LVGQAAESFMLWRGL---RPGTKQILRE 269
            V Q  E F +W GL     G ++++ E
Sbjct: 270 FVEQGREQFRIWTGLDLPAEGARRLIAE 297