Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., shikimate dehydrogenase from Cupriavidus basilensis FW507-4G11

 Score =  234 bits (596), Expect = 2e-66
 Identities = 138/281 (49%), Positives = 177/281 (62%), Gaps = 13/281 (4%)

Query: 6   DQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVT 65
           D+Y V GNPI HS+SP IH  FA+QT +++ Y     P+DGF    + FF  GG G NVT
Sbjct: 8   DRYVVIGNPIAHSRSPAIHAAFAQQTGEAVEYERLLAPLDGFVATVRAFFDGGGHGLNVT 67

Query: 66  VPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDL-LAQQVLLKGA 124
           VPFK EAY  A+RLT RA  AGAVNT+  ++DG I GDNTDG GL +D+ +    LL+G 
Sbjct: 68  VPFKLEAYDLAERLTPRAESAGAVNTM-WIEDGVIHGDNTDGVGLTRDIEVNLDTLLEGK 126

Query: 125 TILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVA----AYG-EVKAQAFE 179
            ILL+GAGGAA G + PL+  +P  I V NRT  +A  + E VA     YG E+    F+
Sbjct: 127 RILLLGAGGAAMGAMLPLIACRPERIVVANRTPQRASDILENVAQQADEYGVELWGGGFD 186

Query: 180 QL-----KQSYDVIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGKGYTVFNQWARQHG 234
            L     + + DV+IN+TS+SL GELP +   +     + YDMMYG   TVF ++A Q G
Sbjct: 187 ALAGLTDEDACDVVINATSSSLQGELPPVPAELLGKGVLAYDMMYGAEPTVFLKFAAQCG 246

Query: 235 CAQAIDGLGMLVGQAAESFMLWRGLRPGTKQILRELRKNLE 275
            A+  DGLGMLV QAAE+F  WRG+RP T  +L  LR  L+
Sbjct: 247 -ARTSDGLGMLVEQAAEAFYNWRGVRPATAPVLATLRAALQ 286