Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 287 a.a., shikimate 5-dehydrogenase from Burkholderia phytofirmans PsJN

 Score =  248 bits (634), Expect = 8e-71
 Identities = 144/276 (52%), Positives = 179/276 (64%), Gaps = 15/276 (5%)

Query: 6   DQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVT 65
           D+YAV GNP+ HSKSPFIH  FA QT +++ Y     PVD F    + F   GGRG NVT
Sbjct: 8   DRYAVIGNPVGHSKSPFIHGRFAAQTGEAVEYGHLLAPVDAFVPHVRAFIDAGGRGLNVT 67

Query: 66  VPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDL-LAQQVLLKGA 124
           VPFK +A+ FAD L+ RA  AGAVNTL + D   I GDNTDG GLV+D+ +   V LKGA
Sbjct: 68  VPFKLDAHAFADTLSPRAAAAGAVNTL-RFDANGIYGDNTDGFGLVRDIEVNLGVSLKGA 126

Query: 125 TILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLK-- 182
            ILL+GAGGAARGV+ P+LD+ P ++T+ NRT  KAE    LVA + +    A  QL   
Sbjct: 127 RILLLGAGGAARGVVLPMLDRAPHTLTIVNRTAEKAE---ALVAQFAQAARDAACQLSGG 183

Query: 183 -------QSYDVIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGKGYTVFNQWARQHGC 235
                   +YDVI+N+T+ SLD  LP  D   F + ++ YDMMYG   TVF + AR+ G 
Sbjct: 184 SARAIEAGTYDVIVNATAGSLDASLPECDDRAFGNGTLAYDMMYGAHPTVFMEHARKLG- 242

Query: 236 AQAIDGLGMLVGQAAESFMLWRGLRPGTKQILRELR 271
           A+  DGLGMLV QAAESF +WRG+RP    +L ELR
Sbjct: 243 ARGADGLGMLVEQAAESFYVWRGVRPDGAPVLAELR 278