Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., shikimate 5-dehydrogenase (RefSeq) from Shewanella sp. ANA-3

 Score =  287 bits (734), Expect = 2e-82
 Identities = 147/277 (53%), Positives = 187/277 (67%), Gaps = 6/277 (2%)

Query: 5   IDQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNV 64
           +D+YAVFGNPI HSKSPFIH  FA  TQQ++ Y A   P+DGF  + + FF  GG+G NV
Sbjct: 12  LDRYAVFGNPIGHSKSPFIHGQFASLTQQTLSYEAILAPIDGFEASLRAFFQAGGKGANV 71

Query: 65  TVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVLLKGA 124
           TVPFKE+A+   D L+  A LAGAVNTL  L DG I GDNTDG GLV DL+     L+  
Sbjct: 72  TVPFKEQAFALCDSLSAEATLAGAVNTLSLLADGTIYGDNTDGLGLVADLVRHLGSLQHK 131

Query: 125 TILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGE------VKAQAF 178
            +LL+GAGGAARG + PLL  +   + +TNRT +KA+ L ++ +   E      ++A + 
Sbjct: 132 RVLLVGAGGAARGCILPLLKAEVGQLVITNRTQSKAQALVDIFSQVQEGRYSDKLQAVSM 191

Query: 179 EQLKQSYDVIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCAQA 238
            +L   +D++INSTSASL GELP +   I  +++ CYDMMYG   T FNQWA Q G AQ 
Sbjct: 192 SELSGVFDLVINSTSASLAGELPPLSQSIIGNKTACYDMMYGAKPTAFNQWALQQGAAQV 251

Query: 239 IDGLGMLVGQAAESFMLWRGLRPGTKQILRELRKNLE 275
           IDGLGMLVGQAA+SF LWRG+ P T  +L+ LR  L+
Sbjct: 252 IDGLGMLVGQAAKSFALWRGVEPDTSGVLKLLRDKLQ 288