Pairwise Alignments

Query, 190 a.a., DNA topoisomerase from Vibrio cholerae E7946 ATCC 55056

Subject, 655 a.a., DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster from Pseudomonas fluorescens FW300-N2E2

 Score = 40.4 bits (93), Expect = 7e-08
 Identities = 15/33 (45%), Positives = 20/33 (60%)

Query: 24  CPQCGAALQLRHGKHGPFLGCTAYPECDYIKPL 56
           CP C A++  R GK GPF  C+ YP+C    P+
Sbjct: 616 CPLCNASMLRRKGKSGPFWSCSQYPDCKGTVPI 648



 Score = 36.2 bits (82), Expect = 1e-06
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 66  ELGVPCPECGHELVLRQGRYGMFIGCSHYPQC 97
           E G  CP C   ++ R+G+ G F  CS YP C
Sbjct: 611 EAGPVCPLCNASMLRRKGKSGPFWSCSQYPDC 642



 Score = 28.1 bits (61), Expect = 3e-04
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 116 LCPECGKGHLIERKSRFGKLFYACDAYPKCK 146
           +CP C    ++ RK + G  F++C  YP CK
Sbjct: 615 VCPLCNAS-MLRRKGKSGP-FWSCSQYPDCK 643