Pairwise Alignments

Query, 190 a.a., DNA topoisomerase from Vibrio cholerae E7946 ATCC 55056

Subject, 655 a.a., DNA topoisomerase III from Pseudomonas fluorescens FW300-N2C3

 Score = 40.0 bits (92), Expect = 9e-08
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 24  CPQCGAALQLRHGKHGPFLGCTAYPECDYIKPLHQN 59
           CP C A++  R GK GPF  C+ YP+C    P+ ++
Sbjct: 616 CPICDASMLRRKGKSGPFWSCSHYPDCKGTVPIRKD 651



 Score = 38.9 bits (89), Expect = 2e-07
 Identities = 15/32 (46%), Positives = 19/32 (59%)

Query: 66  ELGVPCPECGHELVLRQGRYGMFIGCSHYPQC 97
           E G  CP C   ++ R+G+ G F  CSHYP C
Sbjct: 611 EAGPVCPICDASMLRRKGKSGPFWSCSHYPDC 642



 Score = 27.3 bits (59), Expect = 6e-04
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 116 LCPECGKGHLIERKSRFGKLFYACDAYPKCK 146
           +CP C    ++ RK + G  F++C  YP CK
Sbjct: 615 VCPICDAS-MLRRKGKSGP-FWSCSHYPDCK 643