Pairwise Alignments

Query, 190 a.a., DNA topoisomerase from Vibrio cholerae E7946 ATCC 55056

Subject, 870 a.a., DNA topoisomerase I from Pseudomonas syringae pv. syringae B728a

 Score = 45.8 bits (107), Expect = 2e-09
 Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 7/82 (8%)

Query: 21  SSPCPQCGAALQLRHGKHGPFLGCTAYPECDYIKPLHQNDGHI------IKELGVPCPEC 74
           S  C +CG+ +QL+ G+ G F GCT  P+C   + L ++          +K   + C + 
Sbjct: 712 SLECDKCGSEMQLKTGRFGKFFGCTN-PDCKNTRKLLKSGDAAPPKMDPVKMPELKCDKV 770

Query: 75  GHELVLRQGRYGMFIGCSHYPQ 96
               +LR G  G+F+  S +P+
Sbjct: 771 DDTYILRDGASGLFLAASQFPK 792



 Score = 42.4 bits (98), Expect = 2e-08
 Identities = 40/152 (26%), Positives = 59/152 (38%), Gaps = 23/152 (15%)

Query: 14  AHEHALQSSPCPQCGAALQLRHGKHGPFLGCTAY-----PECDYIKPLHQNDGHIIKELG 68
           A++  +   PC  CG  +Q+R    G FLGC+ Y       C     L   D     + G
Sbjct: 594 ANQPVMTDIPCKVCGRPMQIRTASTGVFLGCSGYSLPPKERCKATVNLTPGDEIADDDEG 653

Query: 69  VP----------CPEC--GHELVLRQGRYGMFIGCSHYPQC--HHIESMDSPSQEETSPD 114
                       CP C    +  L   ++ + I C + P C  + IE      +    P 
Sbjct: 654 ESESRVLRGKHRCPICSTAMDAYLLDEKHKLHI-CGNNPDCTGYEIEEGTYRIKGYEGPS 712

Query: 115 ILCPECGKGHLIERKSRFGKLFYACDAYPKCK 146
           + C +CG   +  +  RFGK F+ C   P CK
Sbjct: 713 LECDKCG-SEMQLKTGRFGK-FFGC-TNPDCK 741