Pairwise Alignments

Query, 190 a.a., DNA topoisomerase from Vibrio cholerae E7946 ATCC 55056

Subject, 868 a.a., type I DNA topoisomerase from Pseudomonas aeruginosa PA14

 Score = 46.6 bits (109), Expect = 1e-09
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 7/82 (8%)

Query: 21  SSPCPQCGAALQLRHGKHGPFLGCTAYPECDYIKPLHQNDG------HIIKELGVPCPEC 74
           S  C +CG+ +QL+ G+ G F GCT  P C   + L +N          I+   + C + 
Sbjct: 710 SLECDKCGSEMQLKTGRFGKFFGCTN-PTCKNTRKLLKNGEAAPPKMDAIRMPELKCEKV 768

Query: 75  GHELVLRQGRYGMFIGCSHYPQ 96
               VLR G  GMF+  S +P+
Sbjct: 769 DDIYVLRDGASGMFLAASQFPK 790



 Score = 43.5 bits (101), Expect = 1e-08
 Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 23/152 (15%)

Query: 14  AHEHALQSSPCPQCGAALQLRHGKHGPFLGCTAY-----PECDYIKPLHQNDGHIIKELG 68
           A++  L + PC +CG  + +R    G FLGC+ Y       C     L   D     + G
Sbjct: 592 ANQPTLTNIPCRECGRPMMIRTASTGVFLGCSGYSLPPKERCKATVNLIPGDEIAADDEG 651

Query: 69  VP----------CPEC--GHELVLRQGRYGMFIGCSHYPQC--HHIESMDSPSQEETSPD 114
                       CP C    +  L   ++ + I C + P C  + IE      +    P 
Sbjct: 652 ESESRVLRGKHRCPICSTAMDAYLLDEKHKLHI-CGNNPDCPGYEIEEGQYRIKGYEGPS 710

Query: 115 ILCPECGKGHLIERKSRFGKLFYACDAYPKCK 146
           + C +CG   +  +  RFGK F+ C   P CK
Sbjct: 711 LECDKCG-SEMQLKTGRFGK-FFGC-TNPTCK 739