Pairwise Alignments

Query, 190 a.a., DNA topoisomerase from Vibrio cholerae E7946 ATCC 55056

Subject, 758 a.a., DNA topoisomerase I (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  105 bits (261), Expect = 3e-27
 Identities = 60/178 (33%), Positives = 91/178 (51%), Gaps = 20/178 (11%)

Query: 24  CPQCGAALQLRHGKHGPFLGCTAYPECDYIKPLHQND-GHIIKELGV--------PCPEC 74
           C  CG  + ++ GK G FL C+ YP C   K   +++ G+I  E  +         CP+C
Sbjct: 580 CELCGKPMVIKFGKAGTFLACSGYPACRNTKNFTRDEKGNIQVEQKLREEPEKVGTCPQC 639

Query: 75  GHELVLRQGRYGM-FIGCSHYPQCHHIESMDSPSQEETSPDILCPECG-KGHLIERKSRF 132
           G +LVL++ R G  FI C+ YP C +            S  + CP  G +G L+E+ S+ 
Sbjct: 640 GGDLVLKKARTGSRFIACTKYPDCTYTAPF--------STGVPCPREGCEGVLVEKSSKR 691

Query: 133 GKLFYACDAYPKCKFALNSKPIAQACAQCGFTVMVEKKS-AAGMRYQCANRQCGHIQE 189
           GK+FY+C AYPKC +AL   P+   C  C   ++V K + A G    C  + C + ++
Sbjct: 692 GKIFYSCSAYPKCDYALWDWPVPGPCPDCNSPLLVIKNTRARGRHIACPEKTCKYSRD 749