Pairwise Alignments

Query, 190 a.a., DNA topoisomerase from Vibrio cholerae E7946 ATCC 55056

Subject, 727 a.a., DNA topoisomerase III from Marinobacter adhaerens HP15

 Score = 69.7 bits (169), Expect = 1e-16
 Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 5/77 (6%)

Query: 24  CPQCGAALQLRHGKHGPFLGCTAYPECDYIKPLHQ---NDGHIIKELGVPCPECGHELVL 80
           CP+C A +  R GK G F  CT YP+C   +PL +    DG    +  +PCP C   LV 
Sbjct: 634 CPKCRAPMLEREGKFGRFFACTRYPDCRGTRPLEEATPQDG--TGQKPIPCPHCFSPLVR 691

Query: 81  RQGRYGMFIGCSHYPQC 97
           R+G+ G F GCS++P C
Sbjct: 692 RKGKKGWFWGCSNFPGC 708



 Score = 53.5 bits (127), Expect = 9e-12
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 7/88 (7%)

Query: 71  CPECGHELVLRQGRYGMFIGCSHYPQCHHIESMD--SPSQEETSPDILCPECGKGHLIER 128
           CP+C   ++ R+G++G F  C+ YP C     ++  +P        I CP C    L+ R
Sbjct: 634 CPKCRAPMLEREGKFGRFFACTRYPDCRGTRPLEEATPQDGTGQKPIPCPHC-FSPLVRR 692

Query: 129 KSRFGKLFYACDAYPKCKFAL---NSKP 153
           K + G  F+ C  +P C+  L   N KP
Sbjct: 693 KGKKG-WFWGCSNFPGCRQTLDDDNGKP 719



 Score = 35.4 bits (80), Expect = 2e-06
 Identities = 14/28 (50%), Positives = 17/28 (60%)

Query: 23  PCPQCGAALQLRHGKHGPFLGCTAYPEC 50
           PCP C + L  R GK G F GC+ +P C
Sbjct: 681 PCPHCFSPLVRRKGKKGWFWGCSNFPGC 708