Pairwise Alignments

Query, 371 a.a., DNA-protecting protein DprA from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., DNA processing protein DprA, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  265 bits (677), Expect = 1e-75
 Identities = 148/311 (47%), Positives = 198/311 (63%), Gaps = 7/311 (2%)

Query: 62  KQAEQCLQWRSAANNRYIVTPHCPLYPRLLKEINSSPPVLFIEGIWEAVHDPAVAIVGSR 121
           ++ +  L+W+  A + ++V    PLYP LLK++   P VLF++G  EA+  P++AIVGSR
Sbjct: 32  QKVDAALEWQQQAAHHHLVCFSDPLYPPLLKQLTDPPCVLFVKGCVEALAIPSLAIVGSR 91

Query: 122 NASVDGRQIARQFATELAQSGLVVTSGLALGIDGYAHDGALQAQGQTVAVLGSGLAQVYP 181
           NAS  G Q+A Q A E+   G  + SG+A+GIDG AH   +   G+T+AVLG+G+  +YP
Sbjct: 92  NASPGGLQVAYQLAREMTALGFSICSGMAMGIDGAAHKACVDHAGRTLAVLGTGIDIIYP 151

Query: 182 KQHQGLAERIIAQGALVSEFAPHTPPKADHFPRRNRIISGLSLGVVVVEAAEKSGSLITA 241
           ++H+ L E I  QG ++SEF P   P A +FP+RNRIISGLSLG +VVEA  KSGSLITA
Sbjct: 152 RRHKQLYEDIQRQGCIISEFWPDVGPFAGNFPKRNRIISGLSLGTLVVEACRKSGSLITA 211

Query: 242 RYAAEQGREVFVVPGSIFNAASQGSNQLIRQGACLVQSVQQIHQELKNALTWSLSEQVPY 301
           R A E GREVF VPGSI     QG + L+R GA LV+S   I +EL +   + L E    
Sbjct: 212 RLAMELGREVFAVPGSILGGFHQGCHDLLRDGAKLVESAADIVEELASLTAFHLEE---- 267

Query: 302 QATLFSAVQSDE--ELPFPELLANVGIEATPIDILASRTQIPVQDIMMQLLELELLGHVV 359
                  +Q  E  +LPF  LLA+VG E T ID +   +   +  ++ Q+LELEL G VV
Sbjct: 268 -VNSCHHIQQGEICDLPFSSLLASVGYETTAIDAVVEHSGKTIDLVLEQMLELELQGWVV 326

Query: 360 AVPGGYIRKGR 370
           AVPGGY+R  R
Sbjct: 327 AVPGGYVRVKR 337