Pairwise Alignments

Query, 315 a.a., methionyl-tRNA formyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., methionyl-tRNA formyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  432 bits (1112), Expect = e-126
 Identities = 206/310 (66%), Positives = 256/310 (82%)

Query: 5   LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVY 64
           L+I+FAGTPDFAARHL AL+ SEH++I VY+QP+RPAGRGKKL ASPVK LALEH++PVY
Sbjct: 4   LKILFAGTPDFAARHLQALIDSEHQVIGVYSQPDRPAGRGKKLQASPVKALALEHDIPVY 63

Query: 65  QPENFKSDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAAPI 124
           QP + ++++++ +LAAL AD+MVVVAYGL+LP+VVLDTP+LGCINVHGSILPRWRGAAPI
Sbjct: 64  QPVSLRNEDAQAELAALGADIMVVVAYGLILPQVVLDTPRLGCINVHGSILPRWRGAAPI 123

Query: 125 QRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELGPQALLECL 184
           QR++WAGD+ TGVTIMQMD+GLDTGDML    LPIE  DTSAS+Y+KLAE GP AL++ L
Sbjct: 124 QRALWAGDAATGVTIMQMDIGLDTGDMLLKTHLPIEDRDTSASLYEKLAEQGPSALIQAL 183

Query: 185 QDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPMSHFEVAEN 244
           + +A+G+     QD+ LANYA KLSKEEA+++W   A  + R +RAFNPWP SHF   + 
Sbjct: 184 KGLAEGSLTPEPQDEALANYAEKLSKEEAQLDWRKPAEQLWREVRAFNPWPASHFPHQDA 243

Query: 245 SIKVWQARVETRAVTQTPGTIIQADKSGIYVATGQDVLVLESLQIPGKKALPVQDILNAR 304
           +IKVWQA V   A  Q PGTII+ADK GI VATG+  LVLE++Q+PGKKA+ V D+LNAR
Sbjct: 244 AIKVWQASVSIEAAKQAPGTIIRADKQGIAVATGEGALVLETIQLPGKKAMAVADVLNAR 303

Query: 305 ADWFSVGSQL 314
            DWF+ G+QL
Sbjct: 304 GDWFTPGTQL 313