Pairwise Alignments

Query, 315 a.a., methionyl-tRNA formyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., methionyl-tRNA formyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  197 bits (502), Expect = 2e-55
 Identities = 113/308 (36%), Positives = 173/308 (56%), Gaps = 10/308 (3%)

Query: 3   QSLRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVP 62
           + LRIV+ GTPDFA   L  L+   + ++ V T P++PAGRG K+  SPVK  ALE N+P
Sbjct: 4   EDLRIVYMGTPDFAVEALRQLVEGGYNVVGVITMPDKPAGRGHKIQYSPVKQYALEQNLP 63

Query: 63  VYQPENFKSDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAA 122
           + QPE  K +   Q L    ADL +VVA+  +LP+VV + P+LG  N+H S+LP++RGAA
Sbjct: 64  LLQPEKLKDEAFVQALREWKADLQIVVAF-RMLPEVVWNMPRLGTFNLHASLLPQYRGAA 122

Query: 123 PIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELGPQALLE 182
           PI  ++  GD+ETG+T   +   +DTG +++   +PI  +D    ++DKL  LG + +LE
Sbjct: 123 PINWAVINGDTETGITTFFLQHEIDTGKVIQQVRVPIADTDNVEVVHDKLMILGGKLVLE 182

Query: 183 CLQDIAQGTAVAVKQDD----GLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPMSH 238
            +  I   T   + Q+D    G    A K+ KE  RI+W+     +   IR  +P+P + 
Sbjct: 183 TVDAILNDTVKPIAQEDMAVVGELRPAPKIFKETCRIDWNSPVKKVYDFIRGLSPYPAAW 242

Query: 239 FEVAENS-----IKVWQARVETRAVTQTPGTIIQADKSGIYVATGQDVLVLESLQIPGKK 293
            E+         +K++++     A     GT++   K  I VA     + + SLQ+PGKK
Sbjct: 243 SELVSPEGEAVVMKIFESEKIYEAHQLPVGTVVTDGKKYIKVAVPDGFVSVLSLQLPGKK 302

Query: 294 ALPVQDIL 301
            L   ++L
Sbjct: 303 RLKTDELL 310