Pairwise Alignments

Query, 426 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., Fmu (Sun) (RefSeq) from Shewanella amazonensis SB2B

 Score =  105 bits (262), Expect = 3e-27
 Identities = 80/241 (33%), Positives = 117/241 (48%), Gaps = 12/241 (4%)

Query: 162 VEANNSKAPMWLRVNHQHHTRAEYQALLEQAGIVTTPHAQAEDALCLETPC-DVHQLPGF 220
           V+A   + P+W R   Q  +R +    LE   I   P     DA+ L +   ++  +  +
Sbjct: 184 VDALCRRPPLWTRA--QGTSREQVLKQLEADDIGAVPSKVFADAIELASQSINLDAVTAY 241

Query: 221 AEGWVSVQDAAAQLALTYLAPQAGELILDCCAAPGGKTAHIL----ERTPESQVVAIDCD 276
             G + VQD A+Q      AP+AGE   D CA  GGK+  +     +R    ++VA D  
Sbjct: 242 TSGKLEVQDLASQAIGEVAAPKAGERWWDACAGAGGKSLQLFSLMQKRGGVGELVASDI- 300

Query: 277 ETRLKRVRENLQRLELT--AQVICGDARYPQQWWQGEQFDRILLDAPCSATGVIRRHPDI 334
             R K + E L+R +    A +     R  +   + + FD +L+DAPCS TG  RR+PD+
Sbjct: 301 --RPKALEELLRRADKAGVAPIQLSPWRSDKLPVKADYFDGVLVDAPCSCTGTWRRNPDM 358

Query: 335 KWLRRADDIAALAELQREILDAMWQQLKPGGSLVYATCSITPQENRLQVKAFLERTPDAR 394
           +W+  A  I     LQ +IL      ++ GG LVYATCS+   EN   V+AFL    D  
Sbjct: 359 RWIDDASAILDKPALQLDILRRASAAVRSGGVLVYATCSLARAENEAVVEAFLASDEDFE 418

Query: 395 L 395
           L
Sbjct: 419 L 419