Pairwise Alignments

Query, 426 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., Probable Fmu protein (sun protein) from Mycobacterium tuberculosis H37Rv

 Score =  131 bits (330), Expect = 4e-35
 Identities = 137/452 (30%), Positives = 201/452 (44%), Gaps = 44/452 (9%)

Query: 4   RAAAASALYQVVDLGHSLSNALPA--AQQQIRPRDHALLQEICYGVLRQLPRLESISQAL 61
           R AA   L  V       +  LPA  AQ+ I  RD A   E+ YG  R    L+++  A 
Sbjct: 17  RRAAFETLRAVSARDAYANLVLPALLAQRGIGGRDAAFATELTYGTCRARGLLDAVIGAA 76

Query: 62  MGKPLKGKQRVFHFLILVGLYQLSFMRIPAHAAVGETVEGAQDLKGPRLRGLINAVLRNY 121
             +  +    V   L+ +G YQL   R+ AHAAV  TVE A         G +N VLR  
Sbjct: 77  AERSPQAIDPVLLDLLRLGTYQLLRTRVDAHAAVSTTVEQAGIEFDSARAGFVNGVLRTI 136

Query: 122 Q-RDQEGL------DAQ--ATSHDAGRYGHPGWLLKLLKESYPE---QWQQIVEANNSKA 169
             RD+         DAQ     H A  + HP W+ +   ++      + + ++ +++ + 
Sbjct: 137 AGRDERSWVGELAPDAQNDPIGHAAFVHAHPRWIAQAFADALGAAVGELEAVLASDDERP 196

Query: 170 PMWLRVNHQHHTRAEYQALLEQAGIVTTPHAQAEDALCLETPC-DVHQLPGFAEGWVSVQ 228
            + L       T  E    +       +P A       +  P  D  +L    +G   VQ
Sbjct: 197 AVHLAARPGVLTAGELARAVRGTVGRYSPFA-------VYLPRGDPGRLAPVRDGQALVQ 249

Query: 229 DAAAQL---ALTYLAPQAGEL--ILDCCAAPGGKTAHI--LERTPESQVVAIDCDETRLK 281
           D  +QL   ALT LAP  G+    LD CA PGGKTA +  L     ++V A++    R  
Sbjct: 250 DEGSQLVARALT-LAPVDGDTGRWLDLCAGPGGKTALLAGLGLQCAARVTAVEPSPHRAD 308

Query: 282 RVRENLQRLELTAQVICGDARYPQQWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRRAD 341
            V +N + L +  +++  D R+         FDR+L+DAPC+  G +RR P+ +W R+  
Sbjct: 309 LVAQNTRGLPV--ELLRVDGRHTDL---DPGFDRVLVDAPCTGLGALRRRPEARWRRQPA 363

Query: 342 DIAALAELQREILDAMWQQLKPGGSLVYATCSITPQENRLQVKAFLERTP----DAR--- 394
           D+AALA+LQRE+L A     +PGG ++YATCS    E    V   L R P    D R   
Sbjct: 364 DVAALAKLQRELLSAAIALTRPGGVVLYATCSPHLAETVGAVADALRRHPVHALDTRPLF 423

Query: 395 --LVGSEPAQPGRQILPGEEAMDGFYYAVLSK 424
             ++      P  Q+ P     D  + A L +
Sbjct: 424 EPVIAGLGEGPHVQLWPHRHGTDAMFAAALRR 455