Pairwise Alignments

Query, 426 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., Fmu (Sun) domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  101 bits (252), Expect = 4e-26
 Identities = 72/219 (32%), Positives = 103/219 (47%), Gaps = 22/219 (10%)

Query: 223 GWVSVQDAAAQLALTYLAPQAGELILDCCAAPGGKTAHILERT-PESQVVAIDCDETRLK 281
           G + +QD ++ L    LAP+AG  +LD CA+PG KT  + +   P   VV  + + TRL 
Sbjct: 60  GLIYIQDRSSMLPPLALAPEAGAAVLDMCASPGSKTGFLAQLVGPHGLVVGNEPNHTRLA 119

Query: 282 RVRENLQRLELTAQVIC---GDAR-YPQQWWQGEQFDRILLDAPCSATGVIRRHPDIKWL 337
            +R+NL  L L     C   G+A   P   W      RI LD PCS  G + R+P +  L
Sbjct: 120 TLRQNLFTLNLLNAATCSHPGEALPLPDGSWT-----RIQLDPPCSGWGTVERNPSVLKL 174

Query: 338 RRADDIAALAELQREILDAMWQQLKPGGSLVYATCSITPQENRLQV--------KAFLER 389
            + D +  L  +QR +L    + L PGG +V++TC+    EN  QV           +  
Sbjct: 175 WQGDKVKPLIGIQRLLLAEAARLLAPGGRVVFSTCTTNMHENEAQVLYARDELGLELVPL 234

Query: 390 TPDARLVGSEPAQPG----RQILPGEEAMDGFYYAVLSK 424
            P    V +EP  PG     ++ P      GF+ A L K
Sbjct: 235 APPPGFVFAEPELPGCEGTLRVDPERSGAQGFFIACLRK 273