Pairwise Alignments

Query, 426 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., NOL1/NOP2/sun family putative RNA methylase from Methanococcus maripaludis JJ

 Score = 84.0 bits (206), Expect = 5e-21
 Identities = 63/242 (26%), Positives = 115/242 (47%), Gaps = 8/242 (3%)

Query: 172 WLRVNHQHHTRAEYQALLEQAGIVTTPHAQAEDALCLETPCDVHQLPGFAEGWVSVQDAA 231
           ++RVN    +  + +  LE+ G+              ++P  +   P +  G+  +Q  +
Sbjct: 6   FIRVNTLKISSEDLKKRLEEKGVELEDTFLDYVFRVAKSPFSMGSTPEYLLGYYFLQSIS 65

Query: 232 AQLALTYLAPQAGELILDCCAAPGGKTAHILE-RTPESQVVAIDCDETRLKRVRENLQRL 290
           + +    L P   + +LD CAAPGGKT H+ +    E  ++A++ ++ RLK +R N+ R+
Sbjct: 66  SIIPSITLNPSKDDDVLDMCAAPGGKTTHLAQLMENEGSILAVEINKNRLKSLRSNINRM 125

Query: 291 ELTAQVICGDARYPQQWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRRADDIAALAELQ 350
                ++           +  +F++ILLDAPC+   +     D   ++   DI   A+ Q
Sbjct: 126 GFKNTLMINTNAVNLD--KKLRFNKILLDAPCTGNEI----KDNNRVKTKRDILFCAKRQ 179

Query: 351 REILDAMWQQLKPGGSLVYATCSITPQENRLQVKAFLERTPDARLVG-SEPAQPGRQILP 409
            E+     + LK GG LVY+TCS   +E+   V+  L+   +  L+  +    PG  ++ 
Sbjct: 180 VELFRTAIEVLKDGGELVYSTCSPEIEEDEDIVRYILKTNKNMELIELTVDDFPGINMIE 239

Query: 410 GE 411
           GE
Sbjct: 240 GE 241