Pairwise Alignments

Query, 426 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., NOL1/NOP2/sun family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 84.3 bits (207), Expect = 7e-21
 Identities = 65/225 (28%), Positives = 115/225 (51%), Gaps = 10/225 (4%)

Query: 173 LRVNHQHHTRAEYQALLEQAGIVTTPHAQAEDALCLETPCDVHQLPGFAE---GWVSVQD 229
           +RVN    +  +++ L++  G    P    +D   +    +  QL    E   G   +Q+
Sbjct: 37  IRVNTLKISSEDFKRLMQPKGWTFEPIPWCKDGFWISYD-EEEQLGNALEHIQGLFYIQE 95

Query: 230 AAAQLALTYL-APQAG-ELILDCCAAPGGKTAHILE-RTPESQVVAIDCDETRLKRVREN 286
           A++ L  T L  P A  + +LD  AAPG KT  +      +  +VA +   +R+K +  N
Sbjct: 96  ASSMLPPTALFTPNADWQCVLDLAAAPGSKTTQMAALMNNQGLLVANEYSASRVKVLHAN 155

Query: 287 LQRLELTAQVICG-DARYPQQWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRRADDIAA 345
           + R+  +   +   D R   ++   E FD +L+DAPC   G +R+  D       D++ A
Sbjct: 156 VLRMGASHCALTHFDGRVFGEYLY-ESFDAVLIDAPCGGEGTVRKDVDALKSWSLDEVIA 214

Query: 346 LAELQREILDAMWQQLKPGGSLVYATCSITPQENRLQVKAFLERT 390
           ++E Q+ ++++ +  LKPGGSLVY+TC++   EN+  V  +L++T
Sbjct: 215 ISETQKALIESAFLALKPGGSLVYSTCTLNRHENQ-GVCEYLQQT 258