Pairwise Alignments

Query, 426 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., 16S rRNA m5C967 methyltransferase from Klebsiella michiganensis M5al

 Score =  498 bits (1281), Expect = e-145
 Identities = 254/426 (59%), Positives = 314/426 (73%), Gaps = 2/426 (0%)

Query: 1   MNVRAAAASALYQVVDLGHSLSNALPAAQQQIRPRDHALLQEICYGVLRQLPRLESISQA 60
           +N+R+ AA A+ QV++ G SLSN LP  QQ++  +D ALLQE+C+GVLR L +L+ +   
Sbjct: 5   LNLRSLAAQAVEQVLEQGQSLSNVLPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLIGK 64

Query: 61  LMGKPLKGKQRVFHFLILVGLYQLSFMRIPAHAAVGETVEGAQDLKGPRLRGLINAVLRN 120
           LM +P+ GKQRV H+LI+VG YQL + RIP HAA+ ETVEGA  +K P+L+GLIN VLR 
Sbjct: 65  LMSRPMTGKQRVVHYLIMVGFYQLLYTRIPPHAALAETVEGAVAIKRPQLKGLINGVLRQ 124

Query: 121 YQRDQEGLDAQATSHDAGRYGHPGWLLKLLKESYPEQWQQIVEANNSKAPMWLRVNHQHH 180
           +QR QE L A+ +  +  R+ HP WLLK L+++YP QW+ IVEANN + PMWLRVN  HH
Sbjct: 125 FQRQQEELLAEFSRSEI-RFLHPSWLLKRLQKAYPAQWEAIVEANNQRPPMWLRVNRVHH 183

Query: 181 TRAEYQALLEQAGIVTTPHAQAEDALCLETPCDVHQLPGFAEGWVSVQDAAAQLALTYLA 240
           +R  + ALLE+AG+    H    DA+ LETP  VH LPGF  GWV+VQDA+AQ  +T+L 
Sbjct: 184 SRDSWLALLEEAGMKGFTHPAYPDAVRLETPVPVHALPGFEAGWVTVQDASAQGCMTFLD 243

Query: 241 PQAGELILDCCAAPGGKTAHILERTPESQVVAIDCDETRLKRVRENLQRLELTAQVICGD 300
           PQ  E ILD CAAPGGKT HILE  PE+QV+A+D DE RL RV +NL+RL + A V  GD
Sbjct: 244 PQNDEYILDLCAAPGGKTTHILEAAPEAQVLAVDVDEQRLSRVYDNLKRLGMKATVKQGD 303

Query: 301 ARYPQQWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRRADDIAALAELQREILDAMWQQ 360
            RYP QW   +QFDRILLDAPCSATGVIRRHPDIKWLRR  DIA LA+LQ EILDA+W  
Sbjct: 304 GRYPAQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIAELAQLQAEILDAVWPH 363

Query: 361 LKPGGSLVYATCSITPQENRLQVKAFLERTPDARLVGSEPAQ-PGRQILPGEEAMDGFYY 419
           LK GG+LVYATCS+ P+EN  Q+KAFL+RT DA L  +  A  PG+Q LPG E  DGF+Y
Sbjct: 364 LKSGGTLVYATCSVLPEENSQQIKAFLQRTADAVLNETGDADLPGQQNLPGAEQGDGFFY 423

Query: 420 AVLSKQ 425
           A L K+
Sbjct: 424 AKLIKK 429