Pairwise Alignments

Query, 426 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., 16S rRNA (cytosine967-C5)-methyltransferase from Paraburkholderia bryophila 376MFSha3.1

 Score =  275 bits (702), Expect = 3e-78
 Identities = 174/438 (39%), Positives = 238/438 (54%), Gaps = 38/438 (8%)

Query: 21  LSNALPAAQQQI---RPRDHAL-----LQEICYGVLRQLPRLESISQALMGKPLKGKQRV 72
           L  ALPAA Q +    P   A      +Q+I Y  +R+L   E +   L+ K       V
Sbjct: 47  LGAALPAALQSVFVSAPEGSAAAARGAVQDIAYRTMRRLGTAEWLIAKLVKKA--PPPHV 104

Query: 73  FHFLILVGLYQLSFMRIPAHAAVGETVEGAQDLKGPR----LRGLINAVLRNYQRDQEGL 128
            H L       +      A+       +    +   R     +GL+NAVLRN+ R++E L
Sbjct: 105 GHVLACAIALLIDDEASAAYTPFTVVDQAVSAISARREFSFAKGLVNAVLRNFLREREAL 164

Query: 129 DAQATSHDAGRYGHPGWLLKLLKESYPEQWQQIVEANNSKAPMWLRVNHQHHTRAEYQAL 188
              A + +  R+ +P W +  ++ ++P+ WQ ++ A N++ P+ LRVN +H T   Y  +
Sbjct: 165 LEAAQTDEVARWNYPSWWIDAVRRAWPDAWQDVLAAGNTQGPLTLRVNARHSTVDAYLQV 224

Query: 189 LEQAGIVTTPHAQAEDALCLETPCDVHQLPGFAEGWVSVQDAAAQLALTYLAPQAGELIL 248
           LEQ  I  +     E A+ L TP  V ++PGF+EG VSVQDA AQLA   L  + G  +L
Sbjct: 225 LEQHHIAASK--AGEYAVKLATPMPVDRIPGFSEGVVSVQDAGAQLAAQLLGVRDGMRVL 282

Query: 249 DCCAAPGGKTAHILERTPESQVVAIDCDETRLKRVRENLQRLELTAQVICGDARYPQQWW 308
           D CAAPGGKT H+LE     Q++A++ D TR +R+ ENLQRL+L A+V  GDA  P +W 
Sbjct: 283 DACAAPGGKTGHLLELA-NLQLIALESDATRARRIGENLQRLKLQAEVRIGDAGTPSKWH 341

Query: 309 QG--EQFDRILLDAPCSATGVIRRHPDIKWLRRADDIAALAELQREILDAMWQQLKPGGS 366
               + FDRIL D PCSA+G++RRHPDI+WLRRA DI AL + QR ILDA+W  +KPGG 
Sbjct: 342 DDIDQPFDRILADVPCSASGIVRRHPDIRWLRRASDIPALVDEQRRILDALWPLVKPGGE 401

Query: 367 LVYATCSITPQENRLQVKAFLERTPDA-RL---------VGSEPAQPGRQILPGEEA--- 413
           L+Y TCSI P+E  LQ + F  +  DA RL         V   PA        GE A   
Sbjct: 402 LLYVTCSIFPEEGELQAQWFGNKHQDAVRLDAPGQLLPTVARAPADTSAGSHAGEFADIS 461

Query: 414 ------MDGFYYAVLSKQ 425
                  DGF+YA   K+
Sbjct: 462 AGANSDHDGFFYARFQKR 479