Pairwise Alignments

Query, 426 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., Fmu (Sun) domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  115 bits (288), Expect = 3e-30
 Identities = 87/283 (30%), Positives = 136/283 (48%), Gaps = 22/283 (7%)

Query: 161 IVEANNSKAPMWLRVNHQHHTRAEYQALLEQAGIVTTPHAQAEDALCLETPC-DVHQLPG 219
           ++EA +S+ P+W R        A  Q    +     +P+    DA  L T   +++++  
Sbjct: 192 LIEAMSSRPPIWGRAQGIDSQTAVKQLQALEIDASLSPYFA--DAFNLGTKSMNLNEISL 249

Query: 220 FAEGWVSVQDAAAQLALTYLAPQAGELILDCCAAPGGKTAHI--LERTPESQ-------V 270
           + EG + +QD A+Q+     AP   +   D C+  GGKT  +  L +T  ++       +
Sbjct: 250 YKEGKIEIQDLASQVIGQICAPDPWQHWWDACSGAGGKTLQLRSLMQTAATKQNPLVGSI 309

Query: 271 VAIDCDETRLKRVRENLQRLELTAQVICGDARYPQQWW--QGEQFDRILLDAPCSATGVI 328
           V+ D     L+ + +  QR       I   AR+           FD +L+DAPCS TG  
Sbjct: 310 VSSDIRAHALEELSKRAQRARFDGISI---ARWRSDALPVDANHFDGVLVDAPCSCTGTW 366

Query: 329 RRHPDIKWLRRADDIAALAELQREILDAMWQQLKPGGSLVYATCSITPQENRLQVKAFLE 388
           RR+PD++WL   D +   A LQ +IL    + +K GGSLVYATCS++P EN   V AFL+
Sbjct: 367 RRNPDMRWLDSLDAVTDKATLQLDILSRSSKAVKQGGSLVYATCSLSPVENEQVVSAFLQ 426

Query: 389 RTPDARLVGSEPAQPGRQ-----ILPGEEAMDGFYYAVLSKQH 426
           + P+  LV       G Q     + P E   DG + A + + +
Sbjct: 427 QHPEFSLVPIRHPFTGEQTKMLTVWPFEANTDGMFVARMQRNY 469