Pairwise Alignments

Query, 426 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., Fmu (Sun) domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  142 bits (358), Expect = 2e-38
 Identities = 94/288 (32%), Positives = 143/288 (49%), Gaps = 13/288 (4%)

Query: 141 GHPGWLLKLLKESYPEQWQQIVEANNSKAPMWLRVNHQHHTRAEYQALLEQAGIVTTPHA 200
           G P WL  + +      W++   A ++    +LRVN    TR +    L    + T    
Sbjct: 123 GCPEWLDAMGQAQLAASWEKERAALSTPPKRFLRVNGLKVTRDDLAQKLAAEFVTTQAVE 182

Query: 201 QAEDALCLETPCDVHQLPGFAEGWVSVQDAAAQLALTYLAPQAGELILDCCAAPGGKTAH 260
             + AL + +   + +   F +G    QDA +Q     L  + G  ++D CA  GGKT H
Sbjct: 183 GVDSALEVTSDSALFRTNCFKDGLFEQQDAGSQRVAAALDAKPGMRVIDACAGAGGKTLH 242

Query: 261 ILERTP-ESQVVAIDCDETRLKRVRENLQRL---ELTAQVICGDARYPQQWWQGEQFDRI 316
           I  +   + +++A+D ++ +L  ++E  +R     +  ++I G     +        DR+
Sbjct: 243 IAAQMQGKGRLLAMDVEQWKLDNLKERARRNGAHNIETRLIVGSKTIKRLKLSA---DRV 299

Query: 317 LLDAPCSATGVIRRHPDIKWLRRADDIAALAELQREILDAMWQQLKPGGSLVYATCSITP 376
           LLD PCS  GV++R+PD KW   A+ +  L ELQ+ IL +  + +K GG +VYATCSI P
Sbjct: 300 LLDVPCSGLGVLKRNPDAKWRDTAERLPVLMELQKHILSSYSRMVKVGGIVVYATCSIFP 359

Query: 377 QENRLQVKAFLERTPDARLVGSEPAQPGRQILPGEEAMDGFYYAVLSK 424
            ENR QV AFL   P+ RL+  E       I P E   DGFY A L +
Sbjct: 360 CENRGQVDAFLAENPNFRLLEDE------TISPAETGFDGFYLAKLER 401