Pairwise Alignments

Query, 426 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) from Shewanella sp. ANA-3

 Score = 83.6 bits (205), Expect = 1e-20
 Identities = 64/225 (28%), Positives = 114/225 (50%), Gaps = 10/225 (4%)

Query: 173 LRVNHQHHTRAEYQALLEQAGIVTTPHAQAEDALCLETPCDVHQLPGFAE---GWVSVQD 229
           +RVN    +  +++ L++  G    P    ED   +    +  QL    E   G   +Q+
Sbjct: 65  IRVNTLKTSSEDFKRLMQPKGWTFEPIPWCEDGFWISYD-EEEQLGNALEHIQGLFYIQE 123

Query: 230 AAAQLALTYL-APQAG-ELILDCCAAPGGKTAHILE-RTPESQVVAIDCDETRLKRVREN 286
           A++ L  T L  P A  + +LD  +APG KT  +      +  +VA +   +R+K +  N
Sbjct: 124 ASSMLPPTALFTPNADWQCVLDLASAPGSKTTQMAALMNNQGLLVANEYSASRVKVLHAN 183

Query: 287 LQRLELTAQVICG-DARYPQQWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRRADDIAA 345
           + R+  +   +   D R   ++   E FD +L+DAPC   G +R+  D       D++  
Sbjct: 184 VLRMGASHCALTHFDGRVFGEYLY-ESFDAVLIDAPCGGEGTVRKDADALKSWSLDEVIE 242

Query: 346 LAELQREILDAMWQQLKPGGSLVYATCSITPQENRLQVKAFLERT 390
           ++E Q+ ++++ +  LKPGGSLVY+TC++   EN+  V  +L++T
Sbjct: 243 ISETQKALIESAFLALKPGGSLVYSTCTLNRHENQ-GVCEYLQQT 286