Pairwise Alignments

Query, 458 a.a., Trk system potassium transporter TrkA from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., potassium uptake protein TrkA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  694 bits (1790), Expect = 0.0
 Identities = 352/468 (75%), Positives = 406/468 (86%), Gaps = 11/468 (2%)

Query: 1   MKIIILGAGQVGGTLAENLVGENNDITVVDKNADRLRDLQDKYDLRVVNGHASHPDVLRE 60
           MKIIILGAGQVGGTLAENLVGENNDIT+VD +  RLR LQDKYDLRVV GH +HP+VL+E
Sbjct: 1   MKIIILGAGQVGGTLAENLVGENNDITIVDSDKSRLRALQDKYDLRVVAGHGAHPNVLKE 60

Query: 61  AGAQDADMLVAVTNTDETNMAACQVAFTLFNTPNRIARIRSPQYLAEKEALFQS------ 114
           AGA+DADML+AVTN+DE NM ACQ+A++LF TP +IARIRS  YLA ++ LF +      
Sbjct: 61  AGAEDADMLIAVTNSDECNMVACQMAYSLFGTPTKIARIRSEPYLAMRDKLFINSETKNS 120

Query: 115 -----GAVPVDHLIAPEELVTSYIERLIQYPGALQVVSFAEEKVSLVAVKAYYGGPLVGN 169
                G   +D LIAPE+LVT+YIERL++YPGALQV+ FAE ++SLVAV+AYYGGPLVGN
Sbjct: 121 DGRPRGGFVIDELIAPEQLVTAYIERLVEYPGALQVLEFAEGRLSLVAVRAYYGGPLVGN 180

Query: 170 ALSALRDHMPHIDTRVAAIFRQGRPIRPQGTTIIEADDEVFFVAASNHIRSVMSELQRLE 229
           AL+ALR+HMP+IDTRVAAIFRQGRPI P+GTTIIEADDEVFFVA S HIR+VMSE+Q+L+
Sbjct: 181 ALAALREHMPNIDTRVAAIFRQGRPIMPRGTTIIEADDEVFFVADSRHIRAVMSEMQKLD 240

Query: 230 KPYRRIMIVGGGNIGASLAKRLEQTYSVKLIEHNYQRAEQLSEQLENTIVFCGDAADQEL 289
             YR IMI GGGNIG  LAKRLE+T+SVKLIEH ++RAE LSEQLENT VFCGDA+DQEL
Sbjct: 241 NSYRNIMIAGGGNIGLGLAKRLERTHSVKLIEHKFERAEALSEQLENTTVFCGDASDQEL 300

Query: 290 LSEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKAMVLIQRSGYVDLVQGGVIDVAIS 349
           L EE+IDQ DVFIA+TN+DE NIMSA+LAKRMGAKK MVLIQR  YVD+VQ   ID+AIS
Sbjct: 301 LLEEHIDQTDVFIAVTNDDEANIMSALLAKRMGAKKVMVLIQREAYVDIVQEANIDIAIS 360

Query: 350 PQQATISALLTHVRRADIVNVSSLRRGAAEAIEAIAHGDESTSKVVGRAVGDIKLPPGTT 409
           PQQATISALLTH+R+ DI NV SLRRGAAEAIEAIAHGD STSKVVG+A+GDIKLPPGTT
Sbjct: 361 PQQATISALLTHIRQGDICNVYSLRRGAAEAIEAIAHGDSSTSKVVGKAIGDIKLPPGTT 420

Query: 410 IGAIVRGEEVLIAHDRTVIEQDDHVVMFLVDKKYVPDVETLFQPSPFF 457
           IGAIVR EEVL+AHD+TVIEQ DHVV+FLV+KK++ +VE LFQPS FF
Sbjct: 421 IGAIVRNEEVLMAHDKTVIEQGDHVVLFLVNKKFIGEVEKLFQPSAFF 468