Pairwise Alignments

Query, 481 a.a., potassium uptake protein TrkH from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., TrkH family potassium uptake protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  314 bits (804), Expect = 5e-90
 Identities = 174/487 (35%), Positives = 275/487 (56%), Gaps = 11/487 (2%)

Query: 2   LNLRPITFIIGLVLSKLALFMYVPTLVAFFTGSGGFLDFAQAVIITHLVAFLCLSIGRTE 61
           +  R I  I GL++   ++ M  P LVA +   GG   F QA +++ ++ F+     R  
Sbjct: 1   MQYRTIIRITGLLMGLFSITMLPPALVAIYYKDGGGTAFIQAFVVSLILGFIFWYPNRKH 60

Query: 62  HFRLNVRDMFLITSLVWTIASAFAALPFVFIN--HISFTDAYFETMSGLTTTGSTVLSGL 119
              L  R+ FLI  L WT+  +  ALPF+F +   +S+TD++FE+ S LTTTG+TV+ GL
Sbjct: 61  KSELRTREGFLIVVLFWTVLGSIGALPFIFSSTPDLSWTDSFFESFSALTTTGATVIVGL 120

Query: 120 DDMPPSILLWRSILQWLGGVGFIVMAVAVLPMLNVGGMKLFQTE--SSDWSDKSSPRAKT 177
           D +P +IL +R +LQWLGG+G IV+AVA+LP+L +GGM+L++ E        K +PR   
Sbjct: 121 DSLPKAILFYRHLLQWLGGMGIIVLAVAILPVLGIGGMQLYRAEIPGPVKDSKMTPRIAE 180

Query: 178 VAKNIVAVYLVLTGLCFLSYIATGMTPFEAINHAFTTLSTGGYSTSDSSMNRF-SHGAHW 236
            AK +  +YL+LT  C  +Y A GM+ F+AI H+F+T++ GG+ST D+SM  F S   + 
Sbjct: 181 TAKALWYIYLLLTIACATAYWAAGMSVFDAICHSFSTIAIGGFSTHDASMGYFDSPTINM 240

Query: 237 VGTLFMFLGGLPFLLFVQALRKQ--SARALLKDEQVRGFFWLFMISSLLVAGWLWLKNDY 294
           +  +F+ +  + F +   A+ ++  + R   +D + +    + ++ + +    L+    Y
Sbjct: 241 ICVVFLIIAAVNFSVHFAAMSRRGINLRVYFRDTEFKILVAIQLLLTAICFATLYHSGIY 300

Query: 295 -AILDALRVSMFNIVSVVTTTGYGLDDFTAWGALPSTIFAFLLMAGACSGSTSGGIKVFR 353
            +  +    ++F  VS+ TT G+G + F  W      +  F    G C GST+GGIKV R
Sbjct: 301 DSPEETFDYALFQAVSISTTAGFGTESFHLWPLFLPMLLIFSSFIGGCGGSTAGGIKVIR 360

Query: 354 FQIAMALLKKQLLNLIHPSGIFIQRYNKRPVNEEIIRSVVAFGLTFFITIVVLAGALSAM 413
             + +    ++L  LIHP  +F  R  K  + + ++ +V  F   + +  V+    L AM
Sbjct: 361 VVLLLLQGSRELKRLIHPRAMFSIRIGKTALPDRVVDAVWGFFSAYALVFVICMLILMAM 420

Query: 414 GLDSVTSISGAVTAVANVGPGMGSIIGPTGNFAPLPDAAKWLLSFGMLMGRLEILTILVL 473
           GLD +T+ S     + N+GPG+G +     N+A + D AKW+L   ML GRLEI T+LVL
Sbjct: 421 GLDDITAFSATAACLNNLGPGLGEV---ASNYASIGDGAKWVLVVAMLFGRLEIFTLLVL 477

Query: 474 FFPAFWR 480
           F P FWR
Sbjct: 478 FTPTFWR 484