Pairwise Alignments

Query, 481 a.a., potassium uptake protein TrkH from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., TrkH family potassium uptake protein (RefSeq) from Shewanella loihica PV-4

 Score =  308 bits (790), Expect = 2e-88
 Identities = 173/488 (35%), Positives = 271/488 (55%), Gaps = 11/488 (2%)

Query: 2   LNLRPITFIIGLVLSKLALFMYVPTLVAFFTGSGGFLDFAQAVIITHLVAFLCLSIGRTE 61
           +  R I  I GL++   +L +  P LVA     GG   F QA  ++ L+ F+     R  
Sbjct: 1   MQYRTIIRITGLLMGLFSLSLLPPALVAVIYKDGGGTAFLQAFFLSLLLGFVLWYPNRRH 60

Query: 62  HFRLNVRDMFLITSLVWTIASAFAALPFVFINH--ISFTDAYFETMSGLTTTGSTVLSGL 119
              L  R+ F++  L W +  +  A+PF+F +   +S TD++FE+ S LTTTG+TVL GL
Sbjct: 61  KKDLRTREGFMLVVLFWGVLGSIGAVPFIFSSQPDLSLTDSFFESFSALTTTGATVLVGL 120

Query: 120 DDMPPSILLWRSILQWLGGVGFIVMAVAVLPMLNVGGMKLFQTESSD--WSDKSSPRAKT 177
           D +P +IL +R +LQWLGG+G IV+AVA+LP+L +GGM+L++ E        K +PR   
Sbjct: 121 DSLPKAILFYRHLLQWLGGMGIIVLAVAILPVLGIGGMQLYRAEIPGPVKDSKMTPRIAE 180

Query: 178 VAKNIVAVYLVLTGLCFLSYIATGMTPFEAINHAFTTLSTGGYSTSDSSMNRFSHGA-HW 236
            AK +  +YL LT  C  +Y   GM  F+AI H+F+T++ GG+ST D+SM  F   A + 
Sbjct: 181 TAKALWYIYLALTIACAFAYWVAGMDVFDAICHSFSTIAIGGFSTHDASMGYFDSTAINM 240

Query: 237 VGTLFMFLGGLPFLLFVQALRKQ--SARALLKDEQVRGFFWLFMISSLLVAGWLWLKNDY 294
           V  +F+ +  L F L   A  ++  + +  L+D + +    + +  +L+    L+    Y
Sbjct: 241 VCVVFLLIAALNFSLHFAAFTRRGINLKVYLRDAEFKALIVIQLALTLICFATLYHTGIY 300

Query: 295 -AILDALRVSMFNIVSVVTTTGYGLDDFTAWGALPSTIFAFLLMAGACSGSTSGGIKVFR 353
            +  +    ++F  VS+ TT G+G + F  W      +  F    G C GST+GGIKV R
Sbjct: 301 DSAEETFDFALFQAVSISTTAGFGTESFHMWPLFLPMLLIFSSFIGGCGGSTAGGIKVMR 360

Query: 354 FQIAMALLKKQLLNLIHPSGIFIQRYNKRPVNEEIIRSVVAFGLTFFITIVVLAGALSAM 413
             + +    ++L  L+HP G+F  R N + + + II +V  F   + +  VV    L A+
Sbjct: 361 MILLLLQGSRELKRLVHPRGMFSIRINGKALPDRIIDAVWGFFSAYALVFVVCMLILMAL 420

Query: 414 GLDSVTSISGAVTAVANVGPGMGSIIGPTGNFAPLPDAAKWLLSFGMLMGRLEILTILVL 473
           G+D++T+ S     + N+GPG+G +     N+A + D  KW+L   ML GRLE+ T+LVL
Sbjct: 421 GMDNITAFSATAACLNNLGPGLGEV---ASNYASIGDGEKWVLVVAMLFGRLEVFTLLVL 477

Query: 474 FFPAFWRH 481
           F P FW++
Sbjct: 478 FTPTFWKN 485