Pairwise Alignments

Query, 481 a.a., potassium uptake protein TrkH from Vibrio cholerae E7946 ATCC 55056

Subject, 480 a.a., potassium uptake protein TrkH (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  570 bits (1470), Expect = e-167
 Identities = 278/481 (57%), Positives = 357/481 (74%), Gaps = 1/481 (0%)

Query: 1   MLNLRPITFIIGLVLSKLALFMYVPTLVAFFTGSGGFLDFAQAVIITHLVAFLCLSIGRT 60
           MLN R + FI+GL LS L  FM+ P LVA   G      F  + + T + A LCL  G++
Sbjct: 1   MLNFRALLFILGLFLSMLTAFMFAPMLVAVVNGEETVGSFMLSALATGICASLCLHNGQS 60

Query: 61  EHFRLNVRDMFLITSLVWTIASAFAALPFVFINHISFTDAYFETMSGLTTTGSTVLSGLD 120
           +   LN+RDMFL+TSL W I S FAA+PF   + I +TDA+FETMSG+TTTGSTVL GLD
Sbjct: 61  KGINLNIRDMFLLTSLTWLIVSLFAAMPFTLYHGIGYTDAFFETMSGITTTGSTVLVGLD 120

Query: 121 DMPPSILLWRSILQWLGGVGFIVMAVAVLPMLNVGGMKLFQTESSDWSDKSSPRAKTVAK 180
            M  SIL+WRS+LQWLGG+GFIVMAVA+LP LNVGGM+LF+TESSDWSDK+ PR +++AK
Sbjct: 121 TMDHSILIWRSLLQWLGGIGFIVMAVAILPFLNVGGMRLFRTESSDWSDKAVPRTQSMAK 180

Query: 181 NIVAVYLVLTGLCFLSYIATGMTPFEAINHAFTTLSTGGYSTSDSSMNRFSHGAHWVGTL 240
           ++  +Y++LT +C ++Y   GMT F+AINHA TTLSTGGYSTSDSSM  FS+ AHWVG +
Sbjct: 181 HLFFIYILLTIICSVAYHLAGMTWFQAINHAMTTLSTGGYSTSDSSMAAFSNSAHWVGVV 240

Query: 241 FMFLGGLPFLLFVQALRKQSARALLKDEQVRGFFWLFMISSLLVAGWLWLKNDYAILDAL 300
           FM  GGLP L+FVQ ++++  + +  D QV+GF +     S  +  WLW   D A++DAL
Sbjct: 241 FMAAGGLPLLMFVQMIQQRDVK-VWNDAQVKGFLFFLTFVSCSIGFWLWQTRDIALIDAL 299

Query: 301 RVSMFNIVSVVTTTGYGLDDFTAWGALPSTIFAFLLMAGACSGSTSGGIKVFRFQIAMAL 360
           R+S FN+VSVVTTTGYGL D+ AWGA  +  F FL+  G+CSGSTSGGIK+FRFQIA A+
Sbjct: 300 RLSSFNVVSVVTTTGYGLTDYGAWGAFANIAFLFLMFVGSCSGSTSGGIKIFRFQIAGAI 359

Query: 361 LKKQLLNLIHPSGIFIQRYNKRPVNEEIIRSVVAFGLTFFITIVVLAGALSAMGLDSVTS 420
           +++QL    HP+GIF +RYN R + E+I+RS++ F L +   IV L+  L   GLD VTS
Sbjct: 360 MREQLKQQCHPNGIFRERYNNRLITEDIVRSLITFVLLYMFVIVGLSVILVLTGLDPVTS 419

Query: 421 ISGAVTAVANVGPGMGSIIGPTGNFAPLPDAAKWLLSFGMLMGRLEILTILVLFFPAFWR 480
            +GA+TAV+NVGPG+G IIGP GNF+ LPD AKW LS GML+GRLEILT+ VLF P+FW+
Sbjct: 420 FTGAITAVSNVGPGLGPIIGPVGNFSTLPDLAKWALSLGMLLGRLEILTVAVLFHPSFWK 479

Query: 481 H 481
           +
Sbjct: 480 Y 480