Pairwise Alignments

Query, 481 a.a., potassium uptake protein TrkH from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., Trk system K+ uptake protein trkH (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  307 bits (786), Expect = 6e-88
 Identities = 168/483 (34%), Positives = 278/483 (57%), Gaps = 5/483 (1%)

Query: 1   MLNLRPITFIIGLVLSKLALFMYVPTLVAFFTGSGGFLDFAQAVIITHLVAFLCLSIGRT 60
           M+N R I  I+G +L      +     V+ F        F  +  IT  V  + L+IGR 
Sbjct: 1   MINSRMIYRIMGFLLLIETAMLMCCGGVSLFYKEDDLNSFLLSSAITAFVGVIMLAIGRG 60

Query: 61  EHFRLNVRDMFLITSLVWTIASAFAALPFVFINHI-SFTDAYFETMSGLTTTGSTVLSGL 119
               LN RD ++I S+ W   S F  LP+    +I S TDA+FETMSG ++TG+T+++ +
Sbjct: 61  AEKSLNRRDGYVIVSVAWIAFSFFGMLPYYIGGYIPSVTDAFFETMSGFSSTGATIMNNI 120

Query: 120 DDMPPSILLWRSILQWLGGVGFIVMAVAVLPMLNVGGMKLFQTESSDWS-DKSSPRAKTV 178
           + MP  IL WR++ QW+GG+G +   +AVLP+  +GG+++F  E+S  + DK  PR    
Sbjct: 121 ESMPHGILFWRAMTQWIGGLGIVFFTIAVLPIFGMGGIQVFAAEASGPTHDKVHPRIGVT 180

Query: 179 AKNIVAVYLVLTGLCFLSYIATGMTPFEAINHAFTTLSTGGYSTSDSSMNRF-SHGAHWV 237
           AK I  +Y  +TG   +  +  GM  F++I HAFTT STGG+ST  +S+  + S    +V
Sbjct: 181 AKWIWGIYAGMTGTLIILLVFGGMGLFDSICHAFTTTSTGGFSTKQTSIEYYHSPYIDYV 240

Query: 238 GTLFMFLGGLPFLLFVQALRKQSARALLKDEQVRGFFWLFMISSLLVAGWLWLKNDYAIL 297
            ++FMFL G+ F L +     +  +  + D +++ +F      ++ +A WL+  +     
Sbjct: 241 ISVFMFLSGVNFTLLLLMFNGK-IKKFIHDAELKFYFMSVAFFTVFIAVWLYQTSSMGAE 299

Query: 298 DALRVSMFNIVSVVTTTGYGLDDFTAWGALPSTIFAFLLMAGACSGSTSGGIKVFRFQIA 357
           +A R S+F ++S+ T+TG+   D+  W ++       +++ GAC+GST+GGIK  R  I 
Sbjct: 300 EAFRKSLFQVISLQTSTGFATADYMLWPSILWGCLLIVMIMGACAGSTTGGIKCIRMVIL 359

Query: 358 MALLKKQLLNLIHPSGIFIQRYNKRPVNEEIIRSVVAFGLTFFITIVVLAGALSAMGLDS 417
             + K +  +++HP+ +   R NK+ ++  I  +V+AF   + I  ++    +   G+  
Sbjct: 360 FKVAKNEFKHILHPNAVLPVRVNKQVISPSIQSTVLAFTFLYAIIAIISILVMMGFGVGF 419

Query: 418 VTSISGAVTAVANVGPGMGSIIGPTGNFAPLPDAAKWLLSFGMLMGRLEILTILVLFFPA 477
           + SI   ++++ N+GPG+G+  GP  +++ LPDAAKWLLSF ML+GRLE+ T+L+LF   
Sbjct: 420 LESIGTVISSIGNMGPGLGT-CGPAFSWSELPDAAKWLLSFLMLLGRLELFTVLLLFSSD 478

Query: 478 FWR 480
           FW+
Sbjct: 479 FWK 481