Pairwise Alignments

Query, 481 a.a., potassium uptake protein TrkH from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., TrkH family potassium uptake protein (RefSeq) from Shewanella sp. ANA-3

 Score =  305 bits (781), Expect = 2e-87
 Identities = 170/487 (34%), Positives = 270/487 (55%), Gaps = 11/487 (2%)

Query: 2   LNLRPITFIIGLVLSKLALFMYVPTLVAFFTGSGGFLDFAQAVIITHLVAFLCLSIGRTE 61
           +  + I  IIGL++   ++ M  P L+A +   GG   F QA  ++  + F      R  
Sbjct: 1   MQYKTIIRIIGLLIGLFSITMLPPALIAIWYNDGGGTAFIQAFFVSLFIGFWLWYPNRRC 60

Query: 62  HFRLNVRDMFLITSLVWTIASAFAALPFVFINH--ISFTDAYFETMSGLTTTGSTVLSGL 119
              L  R+ FLI  L WT+  +  ALPF+F +   +S+TD++FE+ S LTTTG+TV+ GL
Sbjct: 61  KEELRTREGFLIVVLFWTVLGSIGALPFIFSSQPDLSWTDSFFESFSALTTTGATVIVGL 120

Query: 120 DDMPPSILLWRSILQWLGGVGFIVMAVAVLPMLNVGGMKLFQTESSD--WSDKSSPRAKT 177
           D +P +IL +R +LQWLGG+G IV+AVA+LP+L VGGM+L++ E        K +PR   
Sbjct: 121 DSLPKAILFYRHMLQWLGGMGIIVLAVAILPVLGVGGMQLYRAEIPGPVKDSKMTPRIAE 180

Query: 178 VAKNIVAVYLVLTGLCFLSYIATGMTPFEAINHAFTTLSTGGYSTSDSSMNRFSHGA-HW 236
            AK +  +YL+LT  C  +Y   GM+ F+A+ H+F+T++ GG+ST D+SM  F     + 
Sbjct: 181 TAKALWYIYLLLTIACAGAYWLAGMSVFDAVCHSFSTIAIGGFSTHDASMGYFDSSVINL 240

Query: 237 VGTLFMFLGGLPFLLFVQALRKQSA--RALLKDEQVRGFFWLFMISSLLVAGWLWLKNDY 294
           +   F+ +  + F +   A  ++    R   +D + +    + ++ + +    L+    Y
Sbjct: 241 ICVFFLIVSAVNFSVHFAAFSRRGINFRVYFRDTEFKMLVAIQLVLTAICFLTLYHSGIY 300

Query: 295 -AILDALRVSMFNIVSVVTTTGYGLDDFTAWGALPSTIFAFLLMAGACSGSTSGGIKVFR 353
            +  + L  ++F  VSV TT G+G + F  W      +  F    G C GST+GGIKV R
Sbjct: 301 DSPEETLDHALFQAVSVATTAGFGTESFHMWPLFLPILLIFSSFIGGCGGSTAGGIKVIR 360

Query: 354 FQIAMALLKKQLLNLIHPSGIFIQRYNKRPVNEEIIRSVVAFGLTFFITIVVLAGALSAM 413
             + +    ++L  L+HP  +F  R   + + + ++ +V  F   + +  V+   AL AM
Sbjct: 361 VILLLLQGSRELKRLVHPKAMFSIRIGSKALPDRVVDAVWGFFSAYALVFVLCMLALMAM 420

Query: 414 GLDSVTSISGAVTAVANVGPGMGSIIGPTGNFAPLPDAAKWLLSFGMLMGRLEILTILVL 473
           GLD +T+ S     + N+GPG+G +     N+A + D AKW+L   ML GRLE+ T+L+L
Sbjct: 421 GLDDITAFSATAACLNNLGPGLGEV---ASNYASIGDGAKWVLVVAMLFGRLEVFTLLIL 477

Query: 474 FFPAFWR 480
           F P FWR
Sbjct: 478 FTPTFWR 484