Pairwise Alignments

Query, 218 a.a., DUF3157 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 203 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 58.2 bits (139), Expect = 1e-13
 Identities = 51/205 (24%), Positives = 101/205 (49%), Gaps = 19/205 (9%)

Query: 28  SLKGNIMKKLILVASIVSLSTWASETLQLKDGRYIQLNDDFTWQYVPQETQPQQTSELAP 87
           S + + +  L+L++S V  +  A  TL+  +G  ++L DDFTW+Y+  ET   + +E+  
Sbjct: 4   SFRLSALSSLLLLSSSVMAADVAIITLE--NGAQVRLKDDFTWEYIITET---KAAEMPV 58

Query: 88  LVLAAPV-------IAQPTLSGVTITVGD--HRPVL--QLSDSGVDVVLSAPRYEHGQLK 136
            V AAP         A   ++ VT    +   RP L    +  G+ V  +  +++  +L 
Sbjct: 59  AVAAAPSTNIVNTNTAAVAVAPVTTLTANAIARPELLGSTAKDGIKVSFTDSQWKGNKLG 118

Query: 137 LSSAITNQSSQSVIAVRLAIRVQDAQGVWSEEQEVTIWQSIKRMAETYLRPRTSVEGKPL 196
           L+  + + S + V  V +        G   + +++ +W++I RM ETYLR     + + +
Sbjct: 119 LTFELASTSGEHVTLVEVETSFFADDGSLLKTEKLGVWKAIFRMPETYLRKGEQRKSRVI 178

Query: 197 ELNLAEQSQY---TLHATIKQIETR 218
            +   +++++    L+  I +IE+R
Sbjct: 179 WIEGVDKNRWQKQLLNLKITEIESR 203