Pairwise Alignments

Query, 215 a.a., hemolysin III family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 205 a.a., channel protein, hemolysin III family from Pseudomonas stutzeri RCH2

 Score =  150 bits (379), Expect = 2e-41
 Identities = 86/199 (43%), Positives = 118/199 (59%), Gaps = 3/199 (1%)

Query: 15  NAISHGVGLILGIVGLVLLLVKAVDQQADALTITSMSIYGGSMIALFLASTLYHAIPYQR 74
           NA +H VG +L  +G + LLV A     +   I S +IYG S+I L+  STLYH++   R
Sbjct: 8   NAWTHLVGALLACLGAIWLLVLAA-LDGELAKIVSAAIYGLSLILLYSISTLYHSLR-GR 65

Query: 75  AKRWLKTFDHCAIYLLIAGSYTPFLLVSLRTPLAVGLMIVIWSLALIGILMKIAFVYRFK 134
           AK  ++  DH +IYLLIAGSYTPF LV+L  P    L  ++W LA+IG+L +I      +
Sbjct: 66  AKVVMRKLDHLSIYLLIAGSYTPFCLVTLAGPWGWTLFGIVWGLAVIGMLQEIKPRSEAR 125

Query: 135 KLSLVTYLTMGWLSLIVIYQLAIHLEVGGLTLLAAGGLIYSLGVIFYV-AKRIPYNHAIW 193
            LSLV Y  MGW+ L+ +  L   L   G   L  GG+ Y++G++F+V   R  + H IW
Sbjct: 126 VLSLVIYAVMGWIVLVAVKPLLAALGGAGFAWLLTGGICYTVGIVFFVFDDRFRHWHGIW 185

Query: 194 HAFVLAGCACHFLAIYLYV 212
           H FV+ G   HF+AI  YV
Sbjct: 186 HIFVMVGSLLHFIAILFYV 204