Pairwise Alignments

Query, 215 a.a., hemolysin III family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., hemolysin III family channel protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  201 bits (511), Expect = 1e-56
 Identities = 102/209 (48%), Positives = 134/209 (64%), Gaps = 1/209 (0%)

Query: 6   SYGFKEEVANAISHGVGLILGIVGLVLLLVKAVDQQADALTITSMSIYGGSMIALFLAST 65
           +Y  +EE+AN +SHG+G++  ++G V +L  ++   + AL    + +YG SM+ LF  ST
Sbjct: 32  AYCEREELANTLSHGIGVLAALIGTVAMLHDSIGHLS-ALQTLGVGLYGLSMVLLFACST 90

Query: 66  LYHAIPYQRAKRWLKTFDHCAIYLLIAGSYTPFLLVSLRTPLAVGLMIVIWSLALIGILM 125
            YH       KR  K FDHCAIYLLIAG+YTPF+L++L       ++  IW  AL GI  
Sbjct: 91  AYHWATSPTLKRKFKLFDHCAIYLLIAGTYTPFVLITLEGAGVDWVLAAIWLFALGGIGF 150

Query: 126 KIAFVYRFKKLSLVTYLTMGWLSLIVIYQLAIHLEVGGLTLLAAGGLIYSLGVIFYVAKR 185
           K+ F++RFK  SL+ YL MGWL + V+ ++   L   G TLL  GGL YSLGV+FY  KR
Sbjct: 151 KLLFLHRFKAFSLLLYLAMGWLCVAVLDKMIAGLSDTGFTLLLTGGLFYSLGVVFYAVKR 210

Query: 186 IPYNHAIWHAFVLAGCACHFLAIYLYVEP 214
           IP+NHAIWH FVL G   HFL IYL V P
Sbjct: 211 IPFNHAIWHLFVLGGAISHFLCIYLTVIP 239