Pairwise Alignments

Query, 215 a.a., hemolysin III family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 212 a.a., Hly-III related proteins (NCBI) from Rhodospirillum rubrum S1H

 Score =  149 bits (375), Expect = 5e-41
 Identities = 76/208 (36%), Positives = 121/208 (58%), Gaps = 3/208 (1%)

Query: 2   SMSNSYGFKEEVANAISHGVGLILGIVGLVLLLVKAVDQQADALTITSMSIYGGSMIALF 61
           S+  +Y   E +A+A  H +G+ LG++  V L++   D      T T+ +IYG  ++ + 
Sbjct: 4   SLFPTYTRAERIADAAIHMLGVPLGLIAAVWLVIAGWD---GGRTTTASAIYGLGLVGML 60

Query: 62  LASTLYHAIPYQRAKRWLKTFDHCAIYLLIAGSYTPFLLVSLRTPLAVGLMIVIWSLALI 121
            AS  Y+   +   K  L+  DH  I+++IAG+YTPF L+ L   +   L   IW+ A++
Sbjct: 61  SASAAYNLASHGTLKHILRRIDHAMIFVMIAGTYTPFALLGLGGEMGGWLCGAIWTTAVL 120

Query: 122 GILMKIAFVYRFKKLSLVTYLTMGWLSLIVIYQLAIHLEVGGLTLLAAGGLIYSLGVIFY 181
           G+  K+   Y +++LSLV YL MGW  L VI  L+  L +  + L+  GG++Y++G  F+
Sbjct: 121 GVASKLLLPYGWERLSLVLYLAMGWAILTVIGPLSDALSMPAIVLVFIGGILYTIGTAFH 180

Query: 182 VAKRIPYNHAIWHAFVLAGCACHFLAIY 209
             KR+P+ +A WH  VLA  ACHF +IY
Sbjct: 181 SFKRLPFQNAFWHLLVLAAAACHFASIY 208