Pairwise Alignments

Query, 215 a.a., hemolysin III family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., hemolysin III family channel protein (RefSeq) from Shewanella loihica PV-4

 Score =  213 bits (542), Expect = 2e-60
 Identities = 112/206 (54%), Positives = 140/206 (67%), Gaps = 1/206 (0%)

Query: 7   YGFKEEVANAISHGVGLILGIVGLVLLLVKAVDQQADALTITSMSIYGGSMIALFLASTL 66
           Y   EE+ANA+SHG+G+I GI+ L   L K  D+  + L +  +++Y  S+I LFL STL
Sbjct: 31  YSRAEELANALSHGLGVIAGILALAFSLHKGWDRLTN-LQLGGLALYCLSIILLFLCSTL 89

Query: 67  YHAIPYQRAKRWLKTFDHCAIYLLIAGSYTPFLLVSLRTPLAVGLMIVIWSLALIGILMK 126
           YH++   + K  LK  DHCAIYLLIAG+YTP + + L +  A  ++I IWSLAL GIL K
Sbjct: 90  YHSVSAPKLKHKLKIADHCAIYLLIAGTYTPLMQILLDSVEADAILIAIWSLALGGILFK 149

Query: 127 IAFVYRFKKLSLVTYLTMGWLSLIVIYQLAIHLEVGGLTLLAAGGLIYSLGVIFYVAKRI 186
             F++RFK  SLV YL MGWL +IV+ QL   +   G  LL AGG+ YS GVIFYV KRI
Sbjct: 150 TLFIHRFKIFSLVLYLVMGWLCVIVMKQLLAAMTPLGFQLLLAGGIFYSTGVIFYVGKRI 209

Query: 187 PYNHAIWHAFVLAGCACHFLAIYLYV 212
           PYNHAIWH FVLAG   HFL +YL V
Sbjct: 210 PYNHAIWHLFVLAGALSHFLCVYLTV 235