Pairwise Alignments

Query, 215 a.a., hemolysin III family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 215 a.a., channel protein, hemolysin III family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  148 bits (374), Expect = 7e-41
 Identities = 80/205 (39%), Positives = 121/205 (59%), Gaps = 9/205 (4%)

Query: 15  NAISHGVGLILGIVGLVLLLVKAVDQQADALTITSMSIYGGSMIALFLASTLYHAIPY-Q 73
           + ++H +G +L ++G VLLLV+A         +T  S++G SM+ L+ ASTLYH +P  +
Sbjct: 10  SGLTHCIGALLAVLGTVLLLVRAASPLLPWHVVT-FSVFGVSMVLLYTASTLYHWLPLPE 68

Query: 74  RAKRWLKTFDHCAIYLLIAGSYTPFLLVSLRTPLAVGLMIVIWSLALIGILMKIAFVYRF 133
           R  R ++  DH  I++ IA +YTP  L+ LR P    L   +W++A+ GI  K+ +++  
Sbjct: 69  RGVRLMRRVDHSMIFVYIAATYTPICLIPLRGPWGWSLFGCVWAVAVAGIFTKVFWLHAP 128

Query: 134 KKLSLVTYLTMGWLSLIVIYQLAIHLEVGGLTLLAAGGLIYSLGVIFYVAKRIPYN---- 189
           + +S   YL MGW++L  IY L ++L+ G L  L AGG  YS G + Y  KR P      
Sbjct: 129 RWVSTGIYLGMGWMALAGIYPLVMNLQAGALAWLVAGGAFYSAGAVIYALKR-PNRFRHF 187

Query: 190 --HAIWHAFVLAGCACHFLAIYLYV 212
             H I+H FV+AG  CHF+ +Y YV
Sbjct: 188 GFHEIFHLFVMAGSFCHFVVMYSYV 212