Pairwise Alignments

Query, 215 a.a., hemolysin III family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., hemolysin III family channel protein (RefSeq) from Shewanella sp. ANA-3

 Score =  229 bits (583), Expect = 4e-65
 Identities = 112/208 (53%), Positives = 146/208 (70%), Gaps = 1/208 (0%)

Query: 5   NSYGFKEEVANAISHGVGLILGIVGLVLLLVKAVDQQADALTITSMSIYGGSMIALFLAS 64
           + Y   EE+AN+ISHG+G+I G+VGLV +++K  D    ++ +T + IYG S+I LFL+S
Sbjct: 20  SGYSLSEEIANSISHGLGVIAGVVGLVFMILKGADHLT-SIQLTGVIIYGASLILLFLSS 78

Query: 65  TLYHAIPYQRAKRWLKTFDHCAIYLLIAGSYTPFLLVSLRTPLAVGLMIVIWSLALIGIL 124
           TLYH++ +   K  LK  DHCAIY LIAG+YTP +L+SL+  L+  ++  IWSLA+ GIL
Sbjct: 79  TLYHSVTHVGWKHKLKIADHCAIYCLIAGTYTPLMLISLQGQLSTIILTAIWSLAIGGIL 138

Query: 125 MKIAFVYRFKKLSLVTYLTMGWLSLIVIYQLAIHLEVGGLTLLAAGGLIYSLGVIFYVAK 184
            K  F++RFKK+SLV YL MGWL + V+  L   +   G  LL  GGL Y+LGV+FYV K
Sbjct: 139 FKTLFIHRFKKMSLVLYLVMGWLCVTVMGDLTAAMSPLGFKLLLLGGLFYTLGVVFYVGK 198

Query: 185 RIPYNHAIWHAFVLAGCACHFLAIYLYV 212
           RIPYNHAIWH FVLAG   HF  IYL V
Sbjct: 199 RIPYNHAIWHLFVLAGAMSHFFCIYLTV 226