Pairwise Alignments

Query, 474 a.a., cytochrome c oxidase accessory protein CcoG from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation from Pseudomonas fluorescens FW300-N2E2

 Score =  489 bits (1258), Expect = e-142
 Identities = 241/469 (51%), Positives = 304/469 (64%), Gaps = 6/469 (1%)

Query: 4   DKIDVKDVTPKVFNPKTHKGQGGDRFNPSNRIYVRESKGTYQKLRRYGGWFLLLLFGLVP 63
           ++I V DVTP    P     +  D +    +IY R   G ++ LR  GG  L LL+    
Sbjct: 3   NQIPVHDVTP----PAKDANKSVDLYASREKIYTRAFTGLFRNLRMAGGALLFLLYFGTV 58

Query: 64  WISYGDRQAILLDIGNQQFNFFGTTLYPQDLTLLALLFMIAAFGLFFITTFLGRVWCGYL 123
           W+++G  QA+  ++  ++F  FG T +PQD  LL+ + +IAAFGLFFIT + GRVWCGY 
Sbjct: 59  WLNWGGHQAVWWNLPERKFFIFGATFWPQDFILLSGMLIIAAFGLFFITVYAGRVWCGYT 118

Query: 124 CPQTVWTFMYIWFEEKLEGNANKRRKQDNSPMTAELVARKTLKHIAWLAIALVTGFTFVG 183
           CPQ+VWT++++W E+  EG+ N+R K D +PM A    RK  KH  WL I  VTG TFVG
Sbjct: 119 CPQSVWTWIFMWCEKVTEGDRNQRIKLDKAPMGANKFLRKLAKHSLWLLIGFVTGMTFVG 178

Query: 184 YFVPIRALVIDFFTLSAAFWPVFWVLFFALCTYGNAGWMRSIMCIHMCPYARFQSAMFDK 243
           YF PIR LV +FFT  A  W  FWV FF L TYGNAGW+R  +CI+MCPYARFQS MFDK
Sbjct: 179 YFTPIRELVFEFFTGQADGWSYFWVGFFTLATYGNAGWLREQVCIYMCPYARFQSVMFDK 238

Query: 244 DTFIVGYDVARGEQRGPRSRKADPKALGLGDCIDCDLCVQVCPTGIDIRDGLQYECINCG 303
           DT IV YD  RGE RGPR +  D KALGLGDCIDC +CVQVCPTGIDIRDGLQ ECI C 
Sbjct: 239 DTLIVSYDPRRGESRGPRKKGVDYKALGLGDCIDCTMCVQVCPTGIDIRDGLQIECIGCA 298

Query: 304 ACIDACDNTMERMGYAKGLISYTTEHRLSGKHTKVMRPKLLGYGAVFLVMIGLFFAQVAA 363
           ACIDACDN M++M Y +GLISYTTEH LSG+ T  +RP+L+GY  V L MI L       
Sbjct: 299 ACIDACDNIMDKMDYPRGLISYTTEHNLSGQKTHKLRPRLIGYALVLLAMISLLVTAFFM 358

Query: 364 VDPAGLTVLRDRTQLFRTNSSGEIENTYNLKVINKTQQPQTYQLSVKGLDPVSWYGKQSV 423
               G  V +DR  L+R N+ G IEN Y+LK++NK Q+  TY L   GL  +   G++ +
Sbjct: 359 RSLVGFDVSKDRV-LYRENAEGRIENVYSLKIMNKDQRDHTYVLEAAGLPDLKLQGRREI 417

Query: 424 VVQPGEVLNLPMTLGAKPENLSSAVTTIQFILHD-ESHQFTLEVESRFI 471
            V  GE+ + P+ L + PE L S+   + FIL D +     +E +SRFI
Sbjct: 418 KVAAGEIYSQPVELSSAPEQLPSSTNEVTFILKDADDESVHVEAKSRFI 466